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酶修饰二级速率常数的pH依赖性可提供游离反应物的pKa值。

The pH-dependence of second-order rate constants of enzyme modification may provide free-reactant pKa values.

作者信息

Brocklehurst K, Dixon H B

出版信息

Biochem J. 1977 Dec 1;167(3):859-62. doi: 10.1042/bj1670859.

Abstract
  1. Reactions of enzymes with site-specific reagents may involve intermediate adsorptive complexes formed by parallel reactions in several protonic states. Accordingly, a profile of the apparent second-order rate constant for the modification reaction (Kobs., the observed rate constant under conditions where the reagent concentration is low enough for the reaction to be first-order in reagent) against pH can, in general, reflect free-reactant-state molecular pKa values only if a quasi-equilibrium condition exists around the reactive protonic state (EHR) of the adsorptive complex. 2. Usually the condition for quasi-equilibrium is expressed in terms of the rate constants around EHR: (formula: see text) i.e. k mod. less than k-2. This often cannot be assessed directly, particularly if it is not possible to determine kmod. 3. It is shown that kmod. must be much less than k-2, however, if kobs. (the pH-independent value of kobs.) less than k+2. 4. Since probable values of k+2 greater than 10(6)M-1.S-1 and since values of kobs. for many modification reactions less than 10(6)M-1.S-1, the equilibrium assumption should be valid, and kinetic study of such reactions should provide reactant-state pKa values. 5. This may not apply to catalyses, because for them the value of kcat./Km may exceed 5 X 10(5)M-1.S-1. 6. The conditions under which the formation of an intermediate complex by parallel pathways may come to quasi-equilibrium are discussed in the Appendix.
摘要
  1. 酶与位点特异性试剂的反应可能涉及由处于几种质子状态的平行反应形成的中间吸附复合物。因此,修饰反应的表观二级速率常数(Kobs.,在试剂浓度低到足以使反应对试剂呈一级反应的条件下观察到的速率常数)对pH的曲线,通常只有在吸附复合物的反应性质子状态(EHR)周围存在准平衡条件时,才能反映自由反应物状态分子的pKa值。2. 通常,准平衡条件用EHR周围的速率常数表示:(公式:见原文)即k mod.小于k-2。这通常无法直接评估,特别是如果无法确定kmod。3. 然而,结果表明,如果kobs.(kobs.的pH无关值)小于k+2,则kmod.必须远小于k-2。4. 由于k+2的可能值大于10(6)M-1·S-1,且许多修饰反应的kobs.值小于10(6)M-1·S-1,因此平衡假设应该是有效的,对这类反应的动力学研究应该能提供反应物状态的pKa值。5. 这可能不适用于催化反应,因为对于催化反应,kcat./Km的值可能超过5×10(5)M-1·S-1。6. 附录中讨论了通过平行途径形成中间复合物可能达到准平衡的条件。

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