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tanatarense 蛋白菌属,新属,一种厌氧、嗜碱、嗜盐、蛋白水解细菌,从腐烂的藻华体中分离得到,以及提议创建蛋白菌科,新科。

Proteinivorax tanatarense gen. nov., sp. nov., an anaerobic, haloalkaliphilic, proteolytic bacterium isolated from a decaying algal bloom, and proposal of Proteinivoraceae fam. nov.

机构信息

Winogradsky Institute of Microbiology RAS, Prospect 60-letija Octiabria, 7, Building 2, Moscow, 117312, Russia.

出版信息

Extremophiles. 2013 Sep;17(5):747-56. doi: 10.1007/s00792-013-0557-1. Epub 2013 Jun 27.

Abstract

Two strains of a novel anaerobic, protein- and nucleoside-utilizing bacterium, Z-910(T) and Z-810, were isolated. The strains were spore-forming, mainly nonmotile rods, exhibiting positive Gram reaction with Gram-positive cell wall structure. The strains were mesophilic and haloalkaliphilic. Cultures used proteins and proteinaceous substrates as carbon, nitrogen, and energy sources. Both strains used also ribonucleosides, cellobiose, pyruvate, and glycerol. Ribose and nucleobases did not support growth. The fermentation products from all utilized substrates were identical but varied in content and included straight and branched acids, as well as hydrogen and ammonia. When grown on tryptone, strain Z-910(T) was able to reduce fumarate, dimethyl sulfoxide, thiosulfate, and elemental sulfur. Neither nitrate nor sulfate was reduced. The DNA G + C content of strain Z-910(T) was 32.2 mol%. Phylogenetic analysis based on the 16S rRNA gene sequence similarity revealed that strains Z-910(T) and Z-810 represented a new branch within the order Clostridiales, with 90.2 % similarity to the nearest genus with a validly published name Anaerobranca gottschalkii DSM 13577(T). According to their physiological, chemotaxonomic, and phylogenetic properties, strains Z-910(T) and Z-810 represented a new genus and novel species, for which the name Proteinivorax tanatarense gen. nov., sp. nov. was proposed. Phylogenetic analysis showed that the genera Proteinivorax gen. nov. and Anaerobranca formed a separate cluster within the order Clostridiales. The family Proteinivoraceae fam. nov. comprising the genera Proteinivorax gen. nov. and Anaerobranca was therefore proposed within the order Clostridiales of the phylum Firmicutes with Proteinivorax as a type genus of the new family.

摘要

两株新型的厌氧、利用蛋白质和核苷的细菌,Z-910(T)和 Z-810,被分离出来。这些菌株是孢子形成的,主要是非运动的棒状,具有革兰氏阳性细胞壁结构的阳性革兰氏反应。这些菌株是中温的,兼嗜碱嗜盐。培养物使用蛋白质和蛋白质类基质作为碳、氮和能源。两种菌株都使用核糖核苷、纤维二糖、丙酮酸盐和甘油。核糖和碱基不能支持生长。所有利用的基质的发酵产物都是相同的,但在含量和组成上有所不同,包括直链和支链酸,以及氢气和氨。当在色氨酸上生长时,菌株 Z-910(T)能够还原延胡索酸盐、二甲基亚砜、硫代硫酸盐和元素硫。硝酸盐和硫酸盐都没有被还原。菌株 Z-910(T)的 DNA G+C 含量为 32.2mol%。基于 16S rRNA 基因序列相似性的系统发育分析表明,菌株 Z-910(T)和 Z-810 代表了梭菌目内的一个新分支,与最近具有有效发表名称的属 Anaerobranca gottschalkii DSM 13577(T)的相似性为 90.2%。根据它们的生理、化学分类学和系统发育特性,菌株 Z-910(T)和 Z-810 代表了一个新的属和新的种,建议使用名称 Proteinivorax tanatarense gen. nov.,sp. nov.。系统发育分析表明,属 Proteinivorax gen. nov.和 Anaerobranca 在梭菌目中形成了一个单独的聚类。因此,提议在厚壁菌门的梭菌目中成立一个新的科 Proteinivoraceae fam. nov.,包含属 Proteinivorax gen. nov.和 Anaerobranca。Proteinivorax gen. nov.作为新科的模式属。

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