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人Robo1受体细胞外片段的表达、衍生化、结晶及实验相位分析

Expression, derivatization, crystallization and experimental phasing of an extracellular segment of the human Robo1 receptor.

作者信息

Barak Reut, Opatowsky Yarden

机构信息

The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, 52900 Ramat-Gan, Israel.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jul;69(Pt 7):771-5. doi: 10.1107/S1744309113014863. Epub 2013 Jun 28.

Abstract

Robo receptors participate in the orchestration of several developmental responses, most notably axonal guidance in the central nervous system. Robo1 contains five tandem Ig-like and three fibronectin type-III (FnIII) domains in its ectodomain, followed by a single-pass transmembrane segment and an intracellular region. A human Robo1 construct that includes the two extracellular membrane-proximal fibronectin (Fn) domains and the juxtamembrane linker was overexpressed in Escherichia coli and purified. Crystals were obtained using the vapour-diffusion method at 293 K and X-ray diffraction data were collected. Molecular-replacement attempts using related Fn domains as search models did not result in a solution. After introducing two additional methionine residues using PCR site-directed mutagenesis, selenomethionine-derivative crystals were produced. These crystals belonged to the primitive orthorhombic space group P212121, with unit-cell parameters a = 27.24, b = 77.64, c = 91.91 Å. Assuming the presence of a monomer in the asymmetric unit gave a crystal volume per protein weight (VM) of 1.97 Å(3) Da(-1) and a solvent content of 37.6%. Anisotropic diffraction data and a fragmented single-wavelength anomalous dispersion electron-density map, to which homology-modelled domains were docked, were obtained.

摘要

Robo受体参与多种发育反应的调控,最显著的是在中枢神经系统中的轴突导向。Robo1在其胞外结构域包含五个串联的免疫球蛋白样结构域和三个纤连蛋白III型(FnIII)结构域,随后是一个单次跨膜片段和一个胞内区域。一种包含两个靠近细胞膜的胞外纤连蛋白(Fn)结构域和近膜连接区的人Robo1构建体在大肠杆菌中过表达并纯化。采用气相扩散法在293 K下获得晶体,并收集X射线衍射数据。使用相关的Fn结构域作为搜索模型进行分子置换尝试未得到结果。通过PCR定点诱变引入两个额外的甲硫氨酸残基后,产生了硒代甲硫氨酸衍生物晶体。这些晶体属于原始正交空间群P212121,晶胞参数为a = 27.24、b = 77.64、c = 91.91 Å。假设不对称单元中存在一个单体,则每蛋白重量的晶体体积(VM)为1.97 ų Da⁻¹,溶剂含量为37.6%。获得了各向异性衍射数据以及一个对接了同源建模结构域的碎片化单波长反常色散电子密度图。

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