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类人猿灵长类动物中血型糖蛋白基因家族的进化。

Evolution of the glycophorin gene family in the hominoid primates.

作者信息

Rearden A, Phan H, Kudo S, Fukuda M

机构信息

Department of Pathology, University of California San Diego, La Jolla 92093.

出版信息

Biochem Genet. 1990 Apr;28(3-4):209-22. doi: 10.1007/BF00561338.

DOI:10.1007/BF00561338
PMID:2383247
Abstract

Analysis of nucleotide sequences of the human glycophorin A (GPA) and glycophorin B (GPB) genes has indicated that the GPA gene most closely resembles the ancestral gene, whereas the GPB gene likely arose from the GPA gene by homologous recombination. To study the evolution of the glycophorin gene family in the hominoid primates, restricted DNA on Southern blots from man, pygmy chimpanzee, common chimpanzee, gorilla, orangutan, and gibbon was probed with cDNA fragments encoding the human GPA and GPB coding and 3'-untranslated regions. This showed the presence in all of the hominoid primates of at least one GPA-like gene. In addition, at least one GPB-like gene was detected in man, both chimpanzee species, and gorilla, strongly suggesting that the event that produced the GPB gene occurred in the common ancestor of man-chimpanzee-gorilla. An unexpected finding in this study was the conservation of EcoRI restriction sites relative to those of the other four enzymes used; the significance of this observation is unclear, but raises the question of nonrandomness of EcoRI restriction sites in noncoding regions. Further analysis of the evolution of this multigene family, including nucleotide sequence analysis, will be useful in clarification of the evolutionary relationships of the hominoid primates, in correlation with the structure and function of the glycophorin molecules, and in assessment of the role of evolution in the autogenicity of glycophorin determinants.

摘要

对人类血型糖蛋白A(GPA)和血型糖蛋白B(GPB)基因的核苷酸序列分析表明,GPA基因与祖先基因最为相似,而GPB基因可能是通过同源重组从GPA基因产生的。为了研究类人猿灵长类动物中血型糖蛋白基因家族的进化,用人、侏儒黑猩猩、普通黑猩猩、大猩猩、猩猩和长臂猿的Southern印迹上的限制性DNA,用编码人类GPA和GPB编码区及3'非翻译区的cDNA片段进行杂交。这表明在所有类人猿灵长类动物中都存在至少一个GPA样基因。此外,在人、两种黑猩猩和大猩猩中都检测到了至少一个GPB样基因,这强烈表明产生GPB基因的事件发生在人类 - 黑猩猩 - 大猩猩的共同祖先中。这项研究中的一个意外发现是相对于所用的其他四种酶,EcoRI限制性位点的保守性;这一观察结果的意义尚不清楚,但提出了非编码区中EcoRI限制性位点非随机性的问题。对这个多基因家族进化的进一步分析,包括核苷酸序列分析,将有助于阐明类人猿灵长类动物的进化关系,与血型糖蛋白分子的结构和功能相关,并评估进化在血型糖蛋白决定簇自身抗原性中的作用。

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Evolution of the glycophorin gene family in the hominoid primates.类人猿灵长类动物中血型糖蛋白基因家族的进化。
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本文引用的文献

1
"A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.一种将DNA限制性内切酶片段放射性标记至高比活度的技术。附录
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Estimation of phylogenetic relationships from DNA restriction patterns and selection of endonuclease cleavage sites.根据DNA限制性酶切图谱估计系统发育关系及选择核酸内切酶切割位点
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Evolution of glycophorin A in the hominoid primates studied with monoclonal antibodies, and description of a sialoglycoprotein analogous to human glycophorin B in chimpanzee.
鉴定出一个前体基因组片段,该片段提供了血型糖蛋白B和E基因特有的序列。
Proc Natl Acad Sci U S A. 1993 Aug 1;90(15):7220-4. doi: 10.1073/pnas.90.15.7220.
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Sequence diversification and exon inactivation in the glycophorin A gene family from chimpanzee to human.从黑猩猩到人类的血型糖蛋白A基因家族中的序列多样化和外显子失活。
J Mol Evol. 1995 Oct;41(4):478-86. doi: 10.1007/BF00160319.
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Multiple restriction fragment length polymorphisms associated with the Vc determinant of the MN blood group-related chimpanzee V-A-B-D system.与MN血型相关的黑猩猩V-A-B-D系统的Vc决定簇相关的多个限制性片段长度多态性。
Biochem Genet. 1990 Apr;28(3-4):223-31. doi: 10.1007/BF00561339.
用单克隆抗体研究类人猿灵长类动物中血型糖蛋白A的进化,并描述黑猩猩中一种类似于人类血型糖蛋白B的唾液酸糖蛋白。
J Immunol. 1986 Apr 1;136(7):2504-9.
4
Human glycophorin A and B are encoded by separate, single copy genes coordinately regulated by a tumor-promoting phorbol ester.人类血型糖蛋白A和B由单独的单拷贝基因编码,这些基因受促肿瘤佛波酯的协同调控。
J Biol Chem. 1986 Sep 25;261(27):12433-6.
5
Molecular cloning of a human glycophorin B cDNA: nucleotide sequence and genomic relationship to glycophorin A.人血型糖蛋白B cDNA的分子克隆:核苷酸序列及其与血型糖蛋白A的基因组关系
Proc Natl Acad Sci U S A. 1987 Oct;84(19):6735-9. doi: 10.1073/pnas.84.19.6735.
6
Alteration of the genes for glycophorin A and B in glycophorin-A-deficient individuals.血型糖蛋白A缺乏个体中血型糖蛋白A和B基因的改变。
Eur J Biochem. 1988 Nov 15;177(3):605-14. doi: 10.1111/j.1432-1033.1988.tb14413.x.
7
Delta glycophorin (glycophorin B) gene deletion in two individuals homozygous for the S--s--U-- blood group phenotype.两名S--s--U--血型表型纯合子个体中的δ血型糖蛋白(血型糖蛋白B)基因缺失。
Blood. 1987 Dec;70(6):1830-5.
8
Structural organization of glycophorin A and B genes: glycophorin B gene evolved by homologous recombination at Alu repeat sequences.血型糖蛋白A和B基因的结构组织:血型糖蛋白B基因通过Alu重复序列处的同源重组进化而来。
Proc Natl Acad Sci U S A. 1989 Jun;86(12):4619-23. doi: 10.1073/pnas.86.12.4619.
9
Identification of a novel human glycophorin, glycophorin E, by isolation of genomic clones and complementary DNA clones utilizing polymerase chain reaction.通过利用聚合酶链反应分离基因组克隆和互补DNA克隆来鉴定一种新型人类血型糖蛋白——血型糖蛋白E。
J Biol Chem. 1990 Jan 15;265(2):1102-10.
10
Multiple restriction fragment length polymorphisms associated with the Vc determinant of the MN blood group-related chimpanzee V-A-B-D system.与MN血型相关的黑猩猩V-A-B-D系统的Vc决定簇相关的多个限制性片段长度多态性。
Biochem Genet. 1990 Apr;28(3-4):223-31. doi: 10.1007/BF00561339.