一种用于识别静息态 fMRI 独立成分分析中伪影的自动化方法。
An automated method for identifying artifact in independent component analysis of resting-state FMRI.
机构信息
The Florey Institute of Neuroscience and Mental Health, The University of Melbourne, Austin Hospital , Melbourne, VIC , Australia ; Department of Medicine, The University of Melbourne , Melbourne, VIC , Australia.
出版信息
Front Hum Neurosci. 2013 Jul 10;7:343. doi: 10.3389/fnhum.2013.00343. eCollection 2013.
An enduring issue with data-driven analysis and filtering methods is the interpretation of results. To assist, we present an automatic method for identification of artifact in independent components (ICs) derived from functional MRI (fMRI). The method was designed with the following features: does not require temporal information about an fMRI paradigm; does not require the user to train the algorithm; requires only the fMRI images (additional acquisition of anatomical imaging not required); is able to identify a high proportion of artifact-related ICs without removing components that are likely to be of neuronal origin; can be applied to resting-state fMRI; is automated, requiring minimal or no human intervention. We applied the method to a MELODIC probabilistic ICA of resting-state functional connectivity data acquired in 50 healthy control subjects, and compared the results to a blinded expert manual classification. The method identified between 26 and 72% of the components as artifact (mean 55%). About 0.3% of components identified as artifact were discordant with the manual classification; retrospective examination of these ICs suggested the automated method had correctly identified these as artifact. We have developed an effective automated method which removes a substantial number of unwanted noisy components in ICA analyses of resting-state fMRI data. Source code of our implementation of the method is available.
数据驱动的分析和过滤方法存在一个持久的问题,即结果的解释。为此,我们提出了一种从功能磁共振成像(fMRI)中提取独立成分(IC)的自动识别伪影的方法。该方法具有以下特点:不需要 fMRI 范式的时间信息;不需要用户对算法进行训练;仅需要 fMRI 图像(不需要额外获取解剖图像);能够识别出很大比例的与伪影相关的 IC,而不会去除可能源自神经元的组件;可应用于静息态 fMRI;自动化,仅需最少或无需人工干预。我们将该方法应用于 50 名健康对照者静息态功能连接数据的 MELODIC 概率性 ICA,并将结果与盲法专家手动分类进行比较。该方法将 26%至 72%的成分识别为伪影(平均 55%)。约 0.3%被识别为伪影的成分与手动分类不一致;对这些 IC 的回顾性检查表明,自动方法正确地将其识别为伪影。我们已经开发出一种有效的自动方法,可以去除静息态 fMRI 数据中 ICA 分析中大量不需要的噪声成分。我们实现该方法的源代码是可用的。
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