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Flaviramulus ichthyoenteri sp. nov.,一种从牙鲆(Paralichthys olivaceus)肠道中分离得到的 N-酰基高丝氨酸内酯降解菌,以及 Flaviramulus 属和 Flaviramulus basaltis 的描述修订。

Flaviramulus ichthyoenteri sp. nov., an N-acylhomoserine lactone-degrading bacterium isolated from the intestine of a flounder (Paralichthys olivaceus), and emended descriptions of the genus Flaviramulus and Flaviramulus basaltis.

机构信息

College of Marine Life Sciences, Ocean University of China, Qingdao 266003, PR China.

出版信息

Int J Syst Evol Microbiol. 2013 Dec;63(Pt 12):4477-4483. doi: 10.1099/ijs.0.053744-0. Epub 2013 Jul 16.

DOI:10.1099/ijs.0.053744-0
PMID:23859948
Abstract

A Gram-stain-negative, strictly aerobic, yellow-pigmented, rod-shaped and N-acylhomoserine lactone-degrading bacterium, designated strain Th78(T), was isolated from the intestine of a cultured flounder (Paralichthys olivaceus). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain Th78(T) belonged to the genus Flaviramulus (family Flavobacteriaceae) and showed the highest 16S rRNA gene sequence similarity to Flaviramulus basaltis H35(T) (96.70 %). Optimal growth occurred in the presence of 2-3 % (w/v) NaCl, at pH 7.0-8.0 and at 28 °C. The major fatty acids were iso-C15 : 0 3-OH, iso-C15 : 1 G and iso-C17 : 0 3-OH. The major polar lipids were phosphatidylethanolamine, one unidentified aminolipid and three unidentified polar lipids. Menaquinone 6 (MK-6) was the only respiratory quinone. The DNA G+C content of strain Th78(T) was 31.5 mol%. On the basis of polyphasic analysis, strain Th78(T) is considered to represent a novel species of the genus Flaviramulus, for which the name Flaviramulus ichthyoenteri sp. nov. is proposed. The type strain is Th78(T) ( = JCM 18634(T) = KCTC 32142(T) = DSM 26285(T)). Emended descriptions of the genus Flaviramulus and Flaviramulus basaltis are also proposed.

摘要

一株革兰氏阴性、严格需氧、黄色、杆状、能降解 N-酰基高丝氨酸内酯的细菌,被命名为 Th78(T) 菌株,从养殖牙鲆(Paralichthys olivaceus)的肠道中分离得到。基于 16S rRNA 基因序列的系统发育分析表明,菌株 Th78(T) 属于黄杆菌属(Flavobacteriaceae 科),与玄武岩黄杆菌 Flaviramulus basaltis H35(T) 的 16S rRNA 基因序列相似度最高(96.70 %)。最佳生长条件为 2-3 %(w/v)NaCl、pH 7.0-8.0 和 28 °C。主要脂肪酸为 iso-C15:0 3-OH、iso-C15:1 G 和 iso-C17:0 3-OH。主要极性脂为磷脂酰乙醇胺、一种未鉴定的胺脂和三种未鉴定的极性脂。唯一的呼吸醌为menaquinone 6 (MK-6)。菌株 Th78(T) 的 DNA G+C 含量为 31.5 mol%。基于多相分析,菌株 Th78(T) 被认为代表了黄杆菌属的一个新种,建议将其命名为 Flaviramulus ichthyoenteri sp. nov.。模式菌株为 Th78(T)(=JCM 18634(T)=KCTC 32142(T)=DSM 26285(T))。还对黄杆菌属和玄武岩黄杆菌的描述进行了修正。

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