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黄河海杆菌(Polaribacter huanghezhanensis),从北极峡湾沉积物中分离得到的一株新的海洋细菌,兼论海杆菌属的修订。

Polaribacter huanghezhanensis sp. nov., isolated from Arctic fjord sediment, and emended description of the genus Polaribacter.

机构信息

State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Jinan 250100, China.

出版信息

Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):973-978. doi: 10.1099/ijs.0.056788-0. Epub 2013 Dec 18.

Abstract

A Gram-negative, orange-colony-forming, aerobic and non-flagellated bacterium, designated strain SM1202(T), was isolated from marine sediment of Kongsfjorden, Svalbard. Analysis of 16S rRNA gene sequences revealed that strain SM1202(T) was phylogenetically closely related to the genus Polaribacter. It shared the highest 16S rRNA gene sequence similarity with the type strain of Polaribacter dokdonensis (94.2 %) and 92.7-93.9 % sequence similarity with type strains of other known species of the genus Polaribacter. The strain grew at 4-35 °C and with 1.0-5.0 % (w/v) NaCl. It contained iso-C15 : 0, iso-C15 : 0 3-OH, iso-C13 : 0, C15 : 0, iso-C15 : 1 G, iso-C17 : 0 3-OH and C15 : 1ω6c as predominant cellular fatty acids and menaquinone-6 (MK-6) as the major respiratory quinone. The polar lipids of strain SM1202(T) were phosphatidylethanolamine, one unidentified lipid, two unidentified aminophospholipids and one unidentified aminolipid. The genomic DNA G+C content of strain SM1202(T) was 36.4 mol%. On the basis of the data from this polyphasic taxonomic study, strain SM1202(T) represents a novel species in the genus Polaribacter of the family Flavobacteriaceae, for which the name Polaribacter huanghezhanensis sp. nov. is proposed. The type strain of Polaribacter huanghezhanensis is SM1202(T) ( = CCTCC AB 2013148(T) = KCTC 32516(T)). An emended description of the genus Polaribacter is also presented.

摘要

一株革兰氏阴性、橙色菌落形成、需氧且无鞭毛的细菌,被命名为 SM1202(T) 菌株,从斯瓦尔巴群岛康斯峡湾的海洋沉积物中分离得到。16S rRNA 基因序列分析表明,SM1202(T) 菌株与 Polaribacter 属密切相关。它与 Polaribacter dokdonensis 模式菌株的 16S rRNA 基因序列相似度最高(94.2%),与其他已知 Polaribacter 属的模式菌株的相似度为 92.7-93.9%。该菌株在 4-35°C 和 1.0-5.0%(w/v)NaCl 下生长。它含有 iso-C15:0、iso-C15:0 3-OH、iso-C13:0、C15:0、iso-C15:1 G、iso-C17:0 3-OH 和 C15:1ω6c 作为主要的细胞脂肪酸,menaquinone-6(MK-6)作为主要的呼吸醌。SM1202(T) 菌株的极性脂包括磷脂酰乙醇胺、一种未鉴定的脂类、两种未鉴定的氨基磷脂和一种未鉴定的氨基脂类。SM1202(T) 菌株的基因组 DNA G+C 含量为 36.4 mol%。基于多相分类学研究的数据,SM1202(T) 菌株代表了黄淮海海洋杆菌属的一个新种,现提议将其命名为 Polaribacter huanghezhanensis sp. nov.。Polaribacter huanghezhanensis 的模式菌株为 SM1202(T)(=CCTCC AB 2013148(T)=KCTC 32516(T))。还提出了对 Polaribacter 属的修订描述。

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