Derr L K, Kreuzer K N
Duke University Program in Genetics, Durham, NC 27710.
J Mol Biol. 1990 Aug 5;214(3):643-56. doi: 10.1016/0022-2836(90)90283-R.
The uvsW gene of bacteriophage T4 is involved in many aspects of phage DNA metabolism, including replication, recombination and repair. To approach the function of uvsW, the structure and expression of the uvsW gene were first explored. Molecular analyses defined the promoter region, the transcriptional start site, and the probable initiation codon. The required promoter region contains a sequence resembling the consensus for T4 late promoters. Furthermore, transcriptional analyses indicated that uvsW is expressed as a late gene, providing a time frame for uvsW action. Several novel observations restrict possible models for uvsW function. A uvsW-deletion mutation reduced overall phage-phage recombination 1.7-fold, but reduced plasmid integration tenfold relative to the wild-type. Thus, the UsvW protein plays a critical role in a specific recombination pathway involving simple reciprocal exchange. One of the most intriguing phenotypes associated with uvsW mutations is the restoration of arrested DNA synthesis caused by mutations that block secondary initiation, the major mode by which replication initiates at late times in wild-type infections. Experiments with plasmid model systems indicate that a uvsW mutation does not restore the arrested DNA synthesis by rescuing secondary initiation directly. Rather, a uvsW mutation appears to allow some alternative mode of late replication, implying that the UvsW protein normally represses this alternative pathway. The rifampicin resistance of uvsW-repressed replication suggests that it involves either tertiary initiation or some novel mode of initiation. Finally, the inappropriate early expression of uvsW from a heterologous promoter blocks most early phage DNA synthesis in a uvsY-mutant infection, suggesting that the UvsW protein is normally the key regulatory factor in the switch from early to late DNA replication. According to this suggestion, the restored late replication in a uvsW mutant is an abnormal continuation of an early mode(s) of replication.
噬菌体T4的uvsW基因参与噬菌体DNA代谢的许多方面,包括复制、重组和修复。为了探究uvsW的功能,首先对uvsW基因的结构和表达进行了研究。分子分析确定了启动子区域、转录起始位点和可能的起始密码子。所需的启动子区域包含一个类似于T4晚期启动子共有序列的序列。此外,转录分析表明uvsW作为晚期基因表达,为uvsW的作用提供了一个时间框架。一些新的观察结果限制了uvsW功能的可能模型。uvsW缺失突变使噬菌体间的总体重组减少了1.7倍,但相对于野生型,质粒整合减少了10倍。因此,UsvW蛋白在涉及简单相互交换的特定重组途径中起关键作用。与uvsW突变相关的最有趣的表型之一是由阻断二次起始(野生型感染后期复制起始的主要方式)的突变所导致的停滞DNA合成的恢复。质粒模型系统实验表明,uvsW突变不会通过直接挽救二次起始来恢复停滞的DNA合成。相反,uvsW突变似乎允许某种晚期复制的替代模式,这意味着UvsW蛋白通常抑制这种替代途径。uvsW抑制的复制对利福平的抗性表明它涉及三次起始或某种新的起始模式。最后,来自异源启动子的uvsW不适当的早期表达在uvsY突变体感染中阻断了大多数早期噬菌体DNA合成,这表明UvsW蛋白通常是从早期到晚期DNA复制转换中的关键调节因子。根据这一推测,uvsW突变体中恢复的晚期复制是早期复制模式的异常延续。