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家蚕和丽蝇中一种新型的 hAT 元件:与微型反向重复转座元件(MITEs)和水平转移的关系。

A novel hAT element in Bombyx mori and Rhodnius prolixus: its relationship with miniature inverted repeat transposable elements (MITEs) and horizontal transfer.

机构信息

School of Life Sciences, Chongqing University, Chongqing, China.

出版信息

Insect Mol Biol. 2013 Oct;22(5):584-96. doi: 10.1111/imb.12047. Epub 2013 Jul 28.

Abstract

Comparative analysis of transposable elements (TEs) from different species can make it possible to reconstruct their history over evolutionary time. In this study, we identified a novel hAT element in Bombyx mori and Rhodnius prolixus with characteristic GGGCGGCA repeats in its subterminal region. Meanwhile, phylogenetic analysis demonstrated that the elements in these two species might represent a separate cluster of the hAT superfamily. Strikingly, a previously identified miniature inverted repeat transposable element (MITE) shared high identity with this autonomous element across the entire length, supporting the hypothesis that MITEs are derived from the internal deletion of DNA transposons. Interestingly, identity of the consensus sequences of this novel hAT element between B. mori and R. prolixus, which diverged about 370 million years ago, was as high as 96.5% over their full length (about 3.6 kb) at the nucleotide level. The patchy distribution amongst species, coupled with overall lack of intense purifying selection acting on this element, suggest that this novel hAT element might have experienced horizontal transfer between the ancestors of B. mori and R. prolixus. Our results highlight that this novel hAT element could be used as a potential tool for germline transformation of R. prolixus to control the transmission of Trypanosoma cruzi, which causes Chagas disease.

摘要

对不同物种的转座元件 (TEs) 进行比较分析,可以使我们有可能在进化时间上重建它们的历史。在这项研究中,我们在家蚕和 R. prolixus 中鉴定出一种新型的 hAT 元件,其末端区域具有特征性的 GGGCGGCA 重复序列。同时,系统发育分析表明,这两个物种的元件可能代表 hAT 超家族的一个独立簇。引人注目的是,以前鉴定的微型反向重复转座元件 (MITE) 在整个长度上与这个自主元件具有高度同一性,支持了 MITE 是由 DNA 转座子内部缺失产生的假说。有趣的是,37 亿年前分化的家蚕和 R. prolixus 之间这种新型 hAT 元件的共有序列同一性在核苷酸水平上高达 96.5%(全长约 3.6kb)。该元件在物种间的分布不均匀,且总体上缺乏强烈的纯化选择作用,表明该新型 hAT 元件可能在家蚕和 R. prolixus 的祖先之间经历了水平转移。我们的研究结果表明,这种新型的 hAT 元件可作为 R. prolixus 种系转化的潜在工具,以控制引起恰加斯病的克氏锥虫的传播。

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