Chunlab, Inc., Seoul National University, Seoul, Republic of Korea.
Korea University Guro Hospital, Korea University College of Medicine, Seoul, Republic of Korea.
Int J Syst Evol Microbiol. 2013 Dec;63(Pt 12):4633-4638. doi: 10.1099/ijs.0.053751-0. Epub 2013 Aug 9.
A brick-red-coloured, curved-rod-shaped, prostheca-bearing and non-motile bacterial strain, designated JC2236(T), was isolated from a seawater sample of Jeju Island, Republic of Korea. 16S rRNA gene sequence analysis indicated that this strain belongs to the family Hyphomonadaceae and represents a distinct phyletic line that reflects a novel genus status within a clade containing the genera Litorimonas, Hellea, Robiginitomaculum and Algimonas. The predominant isoprenoid quinone (Q10) and polar lipid profile (phosphatidylglycerol, glucuronopyranosyl diglyceride and monoglycosyl diglyderide) were in line with those of most members of the family. However, the DNA G+C content (49.3 mol%), the abundance of C16 : 0, the requirement of sea salts for growth and absence of cell motility differentiated strain JC2236(T) from other closely related genera. Overall enzyme traits also demonstrated that the novel strain is not closely affiliated with any of the previously described genera. Thus, based on data from the present polyphasic taxonomic study, strain JC2236(T) is considered to represent a novel species of a new genus belonging to the family Hyphomonadaceae, for which the name Fretibacter rubidus gen. nov., sp. nov. is proposed. The type strain of Fretibacter rubidus is JC2236(T) ( = KACC 16935(T) = JCM 15585(T)).
一株砖红色、弯曲杆状、具菌毛且不运动的细菌菌株,命名为 JC2236(T),从韩国济州岛的海水样本中分离得到。16S rRNA 基因序列分析表明,该菌株属于噬氢菌科,代表了一个独特的进化枝,在包含 Litorimonas、Hellea、Robiginitomaculum 和 Algimonas 属的进化枝中反映了一个新的属的地位。主要的类异戊二烯醌 (Q10) 和极性脂类图谱 (磷脂酰甘油、葡萄糖醛酸甘油二酯和单糖甘油二酯) 与该科的大多数成员一致。然而,DNA G+C 含量 (49.3 mol%)、C16:0 的丰度、生长所需的海水盐量和缺乏细胞运动性将 JC2236(T) 菌株与其他密切相关的属区分开来。综合酶特征也表明,该新菌株与任何先前描述的属都没有密切关系。因此,根据目前的多相分类学研究数据,菌株 JC2236(T) 被认为代表了噬氢菌科一个新属的新种,该属被命名为 Fretibacter rubidus gen. nov.,sp. nov.。Fretibacter rubidus 的模式菌株为 JC2236(T)( = KACC 16935(T) = JCM 15585(T))。