CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, RNAM Center for Marine Microbiology, CAS, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, 510301, People's Republic of China.
Antonie Van Leeuwenhoek. 2013 Nov;104(5):829-36. doi: 10.1007/s10482-013-9995-0. Epub 2013 Aug 11.
A strictly aerobic, Gram-stain positive, slightly halophilic strain, designated SCSIO 04524(T), was isolated from a deep sea sediment sample collected from the northern South China Sea at a depth of 3415 m. The isolate slightly embedded into the medium after 72 h incubation at 30 °C. Growth was found to occur on media with 0-10 % NaCl but extremely weak growth occurred without supplying NaCl. The predominant menaquinone was determined to be MK-7. The major cellular fatty acid identified was iso-C15:0. The diagnostic polar lipids were determined to be diphosphatidylglycerol, phosphatidyl methylethanolamine, phosphatidylethanolamine and phosphatidylglycerol. The genomic DNA G+C content was determined to be 38 mol%. 16S rRNA gene sequences analysis showed that this strain had the highest similarities with Bacillus carboniphilus JCM 9731(T) (94.7 %) and Bacillus endophyticus 2DT(T) (94.3 %). Phylogenetic analysis revealed that strain SCSIO 04524(T) formed a distinct lineage with Bacillus chungangensis CAU 348(T) and B. carboniphilus JCM 9731(T). Physiological characteristics including utilization of sole nitrogen and carbon sources, and chemotaxonomic properties of cellular fatty acids and polar lipids could readily distinguish strain SCSIO 04524(T) from its most closely related species. Based on this polyphasic taxonomic data, a new species, Bacillus oceani sp. nov., is proposed, with the type strain SCSIO 04524(T) (=DSM 26213(T) = KCTC 33077(T)).
一株严格需氧、革兰氏阳性、轻度嗜盐的菌株,被命名为 SCSIO 04524(T),从南海北部水深 3415 米的深海沉积物样本中分离得到。该菌在 30°C 培养 72 小时后,略微嵌入培养基中。发现该菌在含有 0-10%NaCl 的培养基中生长,但在不提供 NaCl 的情况下生长极弱。主要的menaquinone 被确定为 MK-7。鉴定出的主要细胞脂肪酸为 iso-C15:0。鉴定出的诊断性极性脂为双磷脂酰甘油、磷脂甲基乙醇胺、磷脂乙醇胺和磷脂酰甘油。基因组 DNA G+C 含量为 38 mol%。16S rRNA 基因序列分析表明,该菌株与 Bacillus carboniphilus JCM 9731(T)(94.7%)和 Bacillus endophyticus 2DT(T)(94.3%)的相似度最高。系统发育分析表明,菌株 SCSIO 04524(T)与 Bacillus chungangensis CAU 348(T)和 Bacillus carboniphilus JCM 9731(T)形成一个独特的分支。生理特性包括利用单一氮源和碳源,以及细胞脂肪酸和极性脂的化学分类特性,很容易将菌株 SCSIO 04524(T)与最密切相关的种区分开来。基于这些多相分类数据,提出了一个新种,即 Bacillus oceani sp. nov.,其模式菌株为 SCSIO 04524(T)=DSM 26213(T)=KCTC 33077(T)。