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系统故障。

Bugs in the system.

机构信息

Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-7435, USA.

出版信息

Immunol Rev. 2013 Sep;255(1):256-74. doi: 10.1111/imr.12092.

DOI:10.1111/imr.12092
PMID:23947361
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3748621/
Abstract

Immunity to respiratory virus infection is governed by complex biological networks that influence disease progression and pathogenesis. Systems biology provides an opportunity to explore and understand these multifaceted interactions based on integration and modeling of multiple biological parameters. In this review, we describe new and refined systems-based approaches used to model, identify, and validate novel targets within complex networks following influenza and coronavirus infection. In addition, we propose avenues for extension and expansion that can revolutionize our understanding of infectious disease processes. Together, we hope to provide a window into the unique and expansive opportunity presented by systems biology to understand complex disease processes within the context of infectious diseases.

摘要

呼吸道病毒感染的免疫由影响疾病进展和发病机制的复杂生物网络控制。系统生物学提供了一个机会,可以基于多个生物学参数的整合和建模来探索和理解这些多方面的相互作用。在这篇综述中,我们描述了新的和改进的基于系统的方法,用于在流感和冠状病毒感染后对复杂网络中的新型靶标进行建模、识别和验证。此外,我们还提出了扩展和扩展的途径,可以彻底改变我们对传染病过程的理解。总的来说,我们希望提供一个窗口,了解系统生物学在传染病背景下理解复杂疾病过程所带来的独特而广阔的机会。

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本文引用的文献

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Cell host response to infection with novel human coronavirus EMC predicts potential antivirals and important differences with SARS coronavirus.新型人冠状病毒 EMC 感染宿主细胞的反应预测了潜在的抗病毒药物,并与 SARS 冠状病毒存在重要差异。
mBio. 2013 Apr 30;4(3):e00165-13. doi: 10.1128/mBio.00165-13.
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Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC.二肽基肽酶 4 是新兴的人类冠状病毒-EMC 的功能性受体。
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Modeling host genetic regulation of influenza pathogenesis in the collaborative cross.
中东呼吸综合征冠状病毒和 H5N1 流感病毒通过改变表观遗传景观来拮抗抗原呈递。
Proc Natl Acad Sci U S A. 2018 Jan 30;115(5):E1012-E1021. doi: 10.1073/pnas.1706928115. Epub 2018 Jan 16.
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Viral metagenomics, protein structure, and reverse genetics: Key strategies for investigating coronaviruses.病毒宏基因组学、蛋白质结构与反向遗传学:研究冠状病毒的关键策略。
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Epigenetic Landscape during Coronavirus Infection.冠状病毒感染期间的表观遗传景观
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The Nonstructural Proteins Directing Coronavirus RNA Synthesis and Processing.指导冠状病毒RNA合成与加工的非结构蛋白
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Continuous and Discontinuous RNA Synthesis in Coronaviruses.冠状病毒的连续和不连续 RNA 合成。
Annu Rev Virol. 2015 Nov;2(1):265-88. doi: 10.1146/annurev-virology-100114-055218.
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Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses.致病性流感病毒和冠状病毒采用相似但又截然不同的方式来控制干扰素刺激基因反应。
mBio. 2014 May 20;5(3):e01174-14. doi: 10.1128/mBio.01174-14.
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Immunol Rev. 2013 Sep;255(1):5-12. doi: 10.1111/imr.12109.
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PLoS Pathog. 2013 Feb;9(2):e1003196. doi: 10.1371/journal.ppat.1003196. Epub 2013 Feb 28.
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