Department of Biochemistry, National Defense Medical Center, Neihu, Taipei, Taiwan.
PLoS One. 2013 Aug 9;8(8):e69733. doi: 10.1371/journal.pone.0069733. eCollection 2013.
4-Hydroxylphenylpyruvate dioxygenase (4-HPPD) is an important enzyme for tyrosine catabolism, which catalyzes the conversion of 4-hydroxylphenylpyruvate (4-HPP) to homogentisate. In the present study, human 4-HPPD was cloned and expressed in E. coli. The kinetic parameters for 4-HPP conversion were: k cat=2.2 ± 0.1 s(-1); and K m=0.08 ± 0.02 mM. Sequence alignments show that human 4-HPPD possesses an extended C-terminus compared to other 4-HPPD enzymes. Successive truncation of the disordered tail which follows the final α-helix resulted in no changes in the K m value for 4-HPP substrate but the k cat values were significantly reduced. The results suggest that this disordered C-terminal tail plays an important role in catalysis. For inspection the effect of terminal truncation on protein structure, mutant models were built. These models suggest that the different conformation of E254, R378 and Q375 in the final helix might be the cause of the activity loss. In the structure E254 interacts with R378, the end residue in the final helix; mutation of either one of these residues causes a ca. 95% reductions in k cat values. Q375 provides bifurcate interactions to fix the tail and the final helix in position. The model of the Q375N mutant shows that a solvent accessible channel opens to the putative substrate binding site, suggesting this is responsible for the complete loss of activity. These results highlight the critical role of Q375 in orientating the tail and ensuring the conformation of the terminal α-helix to maintain the integrity of the active site for catalysis.
4-羟基苯丙酮酸双加氧酶(4-HPPD)是酪氨酸分解代谢的重要酶,它催化 4-羟基苯丙酮酸(4-HPP)转化为 4-羟基苯丙酮酸。在本研究中,人 4-HPPD 在大肠杆菌中被克隆和表达。4-HPP 转化的动力学参数为:k cat=2.2±0.1 s(-1);和 K m=0.08±0.02 mM。序列比对表明,与其他 4-HPPD 酶相比,人 4-HPPD 具有延伸的 C 末端。连续截断紧随最后一个α-螺旋的无序尾部,不会改变 4-HPP 底物的 K m 值,但 k cat 值显著降低。结果表明,这个无序的 C 末端尾巴在催化中起着重要作用。为了检查末端截断对蛋白质结构的影响,构建了突变体模型。这些模型表明,最后一个螺旋中 E254、R378 和 Q375 的不同构象可能是活性丧失的原因。在结构中,E254 与最后一个螺旋中的末端残基 R378 相互作用;这两个残基之一的突变导致 k cat 值降低约 95%。Q375 提供分叉相互作用以固定尾巴和最后一个螺旋的位置。Q375N 突变体的模型表明,一个溶剂可及的通道打开到假定的底物结合位点,这表明这是导致完全丧失活性的原因。这些结果突出了 Q375 在定向尾部和确保末端α-螺旋构象以保持活性位点完整性以进行催化方面的关键作用。