From the Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington 99354 and.
J Biol Chem. 2013 Oct 11;288(41):29260-6. doi: 10.1074/jbc.M113.498527. Epub 2013 Aug 21.
Several species of δ proteobacteria are capable of reducing insoluble metal oxides as well as other extracellular electron acceptors. These bacteria play a critical role in the cycling of minerals in subsurface environments, sediments, and groundwater. In some species of bacteria such as Geobacter sulfurreducens, the transport of electrons is proposed to be facilitated by filamentous fibers that are referred to as bacterial nanowires. These nanowires are polymeric assemblies of proteins belonging to the type IVa family of pilin proteins and are mainly comprised of one subunit protein, PilA. Here, we report the high resolution solution NMR structure of the PilA protein from G. sulfurreducens determined in detergent micelles. The protein is >85% α-helical and exhibits similar architecture to the N-terminal regions of other non-conductive type IVa pilins. The detergent micelle interacts with the first 21 amino acids of the protein, indicating that this region likely associates with the bacterial inner membrane prior to fiber formation. A model of the G. sulfurreducens pilus fiber is proposed based on docking of this structure into the fiber model of the type IVa pilin from Neisseria gonorrhoeae. This model provides insight into the organization of aromatic amino acids that are important for electrical conduction.
几种δ变形菌能够还原不溶性金属氧化物和其他细胞外电子受体。这些细菌在地下环境、沉积物和地下水的矿物质循环中起着关键作用。在某些细菌物种中,如脱硫弧菌,电子的传输据说是通过被称为细菌纳米线的丝状纤维来促进的。这些纳米线是属于 IVa 型菌毛蛋白家族的蛋白质的聚合体组装,主要由一个亚基蛋白 PilA 组成。在这里,我们报告了在去污剂胶束中确定的来自 G. sulfurreducens 的 PilA 蛋白的高分辨率溶液 NMR 结构。该蛋白>85%为α-螺旋,其结构与其他非传导性 IVa 型菌毛蛋白的 N 端区域相似。去污剂胶束与该蛋白的前 21 个氨基酸相互作用,表明该区域可能在纤维形成之前与细菌内膜结合。基于将该结构对接入淋病奈瑟氏菌的 IVa 型菌毛蛋白的纤维模型,提出了 G. sulfurreducens 菌毛纤维的模型。该模型提供了对对于电传导很重要的芳香族氨基酸的组织的深入了解。
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