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开发一种 DNA 微阵列方法,用于检测和鉴定所有 15 种不同形式的嗜肺军团菌 O 抗原。

Development of a DNA microarray method for detection and identification of all 15 distinct O-antigen forms of Legionella pneumophila.

机构信息

Key Laboratory of Molecular Microbiology and Technology of the Ministry of Education, TEDA College, Nankai University, TEDA, Tianjin, People's Republic of China.

出版信息

Appl Environ Microbiol. 2013 Nov;79(21):6647-54. doi: 10.1128/AEM.01957-13. Epub 2013 Aug 23.

Abstract

Legionella is ubiquitous in many environments. At least 50 species and 70 serogroups of the Gram-negative bacterium have been identified. Of the 50 species, 20 are pathogenic, and Legionella pneumophila is responsible for the great majority (approximately 90%) of the Legionnaires' disease cases that occur. Furthermore, of the 15 L. pneumophila serogroups identified, O1 alone causes more than 84% of the Legionnaires' disease cases that occur worldwide. Rapid and reliable assays for the detection and identification of L. pneumophila in water, environmental, and clinical samples are in great demand. L. pneumophila bacteria are traditionally identified by their O antigens by immunological methods. We have recently developed an O serogroup-specific DNA microarray for the detection of all 15 distinct O-antigen forms of L. pneumophila, including serogroups O1 to O15. A total of 35 strains were used to verify the specificity of the microarray, including 15 L. pneumophila O-antigen standard reference strains and seven L. pneumophila clinical isolates as target strains, seven reference strains of other non-pneumophila Legionella species as closely related strains, and six non-Legionella bacterial species as nonrelated strains. The detection sensitivity was 1 ng of genomic DNA or 0.4 CFU/ml in water samples with filter enrichment and plate culturing. This study demonstrated that the microarray allows specific, sensitive, and reproducible detection of L. pneumophila serogroups. To the best of our knowledge, this is the first report of a microarray serotyping method for all 15 distinct O-antigen forms of L. pneumophila.

摘要

军团菌广泛存在于许多环境中。至少已经鉴定出 50 种革兰氏阴性细菌和 70 个血清群。在这 50 种细菌中,有 20 种是致病的,而嗜肺军团菌是引起绝大多数(约 90%)军团病病例的原因。此外,在鉴定出的 15 种嗜肺军团菌血清群中,单独的 O1 血清群导致全世界发生的军团病病例超过 84%。因此,人们迫切需要快速、可靠的检测方法,以检测和鉴定水中、环境中和临床样本中的嗜肺军团菌。军团菌传统上通过免疫学方法根据其 O 抗原进行鉴定。我们最近开发了一种 O 血清群特异性 DNA 微阵列,用于检测所有 15 种不同的嗜肺军团菌 O 抗原形式,包括血清群 O1 至 O15。总共使用了 35 株菌株来验证微阵列的特异性,包括 15 株嗜肺军团菌 O 抗原标准参考菌株和 7 株嗜肺军团菌临床分离株作为靶菌株、7 株其他非嗜肺军团菌属的参考菌株作为密切相关的菌株,以及 6 株非军团菌属的细菌作为非相关菌株。在过滤富集和平板培养的水样中,检测灵敏度为 1ng 基因组 DNA 或 0.4CFU/ml。本研究表明,微阵列允许特异性、敏感性和可重复的检测嗜肺军团菌血清群。据我们所知,这是首次报道用于检测所有 15 种不同 O 抗原形式的嗜肺军团菌的微阵列血清分型方法。

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