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过氧乙酸与伯克霍尔德氏菌过氧化氢酶-过氧化物酶(KatG)反应的光谱和动力学研究。

Spectroscopic and kinetic investigation of the reactions of peroxyacetic acid with Burkholderia pseudomallei catalase-peroxidase, KatG.

机构信息

CNRS, Unité de Recherche Mixte CNRS/CEA/Université Paris Sud (UMR 8221), Laboratoire de Bioénergétique, Métalloprotéines et Stress, Centre d'Etudes de Saclay/iBiTec-S , 91191 Gif-sur-Yvette, France.

出版信息

Biochemistry. 2013 Oct 15;52(41):7271-82. doi: 10.1021/bi400963j. Epub 2013 Oct 2.

Abstract

Catalase-peroxidases or KatGs can utilize organic peroxyacids and peroxides instead of hydrogen peroxide to generate the high-valent ferryl-oxo intermediates involved in the catalase and peroxidase reactions. In the absence of peroxidatic one-electron donors, the ferryl intermediates generated with a low excess (10-fold) of peroxyacetic acid (PAA) slowly decay to the ferric resting state after several minutes, a reaction that is demonstrated in this work by both stopped-flow UV-vis absorption measurements and EPR spectroscopic characterization of Burkholderia pseudomallei KatG (BpKatG). EPR spectroscopy showed that the [Fe(IV)═O Trp330(•+)], [Fe(IV)═O Trp139(•)], and [Fe(IV)═O Trp153(•)] intermediates of the peroxidase-like cycle of BpKatG ( Colin, J. Wiseman, B. Switala, J. Loewen, P. C. Ivancich, A. ( 2009 ) J. Am. Chem. Soc. 131 , 8557 - 8563 ), formed with a low excess of PAA at low temperature, are also generated with a high excess (1000-fold) of PAA at room temperature. However, under high excess conditions, there is a rapid conversion to a persistent [Fe(IV)═O] intermediate. Analysis of tryptic peptides of BpKatG by mass spectrometry before and after treatment with PAA showed that specific tryptophan (including W330, W139, and W153), methionine (including Met264 of the M-Y-W adduct), and cysteine residues are either modified with one, two, or three oxygen atoms or could not be identified in the spectrum because of other undetermined modifications. It was concluded that these oxidized residues were the source of electrons used to reduce the excess of PAA to acetic acid and return the enzyme to the ferric state. Treatment of BpKatG with PAA also caused a loss of catalase activity towards certain substrates, consistent with oxidative disruption of the M-Y-W adduct, and a loss of peroxidase activity, consistent with accumulation of the [Fe(IV)═O] intermediate and the oxidative modification of the W330, W139, and W153. PAA, but not H2O2 or tert-butyl hydroperoxide, also caused subunit cross-linking.

摘要

过氧化氢酶过氧化物酶(Catalase-peroxidases 或 KatGs)可以利用有机过氧酸和过氧化物代替过氧化氢来生成过氧化氢酶和过氧化物酶反应中涉及的高价过氧铁-氧中间物。在没有过氧物单电子供体的情况下,用低过量(10 倍)过氧乙酸(PAA)生成的过氧铁中间物在几分钟后缓慢衰减到铁的静止状态,本工作通过停止流动 UV-vis 吸收测量和 Burkholderia pseudomallei KatG(BpKatG)的 EPR 光谱特性来证明这一点。EPR 光谱表明,BpKatG 过氧化物酶样循环的[Fe(IV)═O Trp330(•+)]、[Fe(IV)═O Trp139(•)]和[Fe(IV)═O Trp153(•)]中间物( Colin,J. Wiseman,B. Switala,J. Loewen,P. C. Ivancich,A.(2009)J. Am. Chem. Soc. 131,8557-8563),在低温下用低过量 PAA 形成,也在室温下用高过量(1000 倍)PAA 形成。然而,在高过量条件下,会迅速转化为持久的[Fe(IV)═O]中间物。用 PAA 处理前后通过质谱分析 BpKatG 的胰蛋白酶肽段表明,特定色氨酸(包括 W330、W139 和 W153)、甲硫氨酸(包括 M-Y-W 加合物中的 Met264)和半胱氨酸残基要么被一个、两个或三个氧原子修饰,要么在光谱中无法识别,因为其他未确定的修饰。得出的结论是,这些氧化残基是用于将过量的 PAA 还原为乙酸并将酶还原为铁状态的电子的来源。PAA 处理 BpKatG 也会导致某些底物的过氧化氢酶活性丧失,这与 M-Y-W 加合物的氧化破坏一致,而过氧化物酶活性丧失,与[Fe(IV)═O]中间物的积累和 W330、W139 和 W153 的氧化修饰一致。只有 PAA(而不是 H2O2 或叔丁基过氧化氢)也会引起亚基交联。

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