Department of Microbiology and Molecular Genetics, University of Vermont, Stafford Hall, 95 Carrigan Drive, Burlington, VT 05405-0068, USA.
Department of Microbiology and Molecular Genetics, University of Vermont, Stafford Hall, 95 Carrigan Drive, Burlington, VT 05405-0068, USA.
J Mol Biol. 2014 Jan 9;426(1):43-50. doi: 10.1016/j.jmb.2013.09.025. Epub 2013 Sep 25.
In eukaryotes, the poly(A) tail added at the 3' end of an mRNA precursor is essential for the regulation of mRNA stability and the initiation of translation. Poly(A) polymerase (PAP) is the enzyme that catalyzes the poly(A) addition reaction. Multiple isoforms of PAP have been identified in vertebrates, which originate from gene duplication, alternative splicing or post-translational modifications. The complexity of PAP isoforms suggests that they might play different roles in the cell. Phylogenetic studies indicate that vertebrate PAPs are grouped into three clades termed α, β and γ, which originated from two gene duplication events. To date, all the available PAP structures are from the PAPα clade. Here, we present the crystal structure of the first representative of the PAPγ clade, human PAPγ bound to cordycepin triphosphate (3'dATP) and Ca(2+). The structure revealed that PAPγ closely resembles its PAPα ortholog. An analysis of residue conservation reveals a conserved catalytic binding pocket, whereas residues at the surface of the polymerase are more divergent.
在真核生物中,mRNA 前体 3' 端添加的多聚(A)尾对于 mRNA 稳定性的调节和翻译的起始至关重要。多聚(A)聚合酶(PAP)是催化多聚(A)添加反应的酶。已在脊椎动物中鉴定出多种 PAP 同工型,它们源自基因复制、选择性剪接或翻译后修饰。PAP 同工型的复杂性表明它们可能在细胞中发挥不同的作用。系统发育研究表明,脊椎动物的 PAP 分为三个分支,称为α、β和γ,它们起源于两次基因复制事件。迄今为止,所有可用的 PAP 结构都来自 PAPα 分支。在这里,我们展示了与虫草素三磷酸(3'dATP)和 Ca(2+)结合的人 PAPγ 的第一个 PAPγ 分支代表的晶体结构。该结构表明 PAPγ 与 PAPα 同源物非常相似。对残基保守性的分析揭示了一个保守的催化结合口袋,而聚合酶表面的残基则更加多样化。