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在15摄氏度下的DNA双链断裂修复

DNA double-strand break repair at--15{degrees}C.

作者信息

Dieser Markus, Battista John R, Christner Brent C

机构信息

Louisiana State University, Department of Biological Sciences, Baton Rouge, Louisiana, USA.

出版信息

Appl Environ Microbiol. 2013 Dec;79(24):7662-8. doi: 10.1128/AEM.02845-13. Epub 2013 Sep 27.

DOI:10.1128/AEM.02845-13
PMID:24077718
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3837829/
Abstract

The survival of microorganisms in ancient glacial ice and permafrost has been ascribed to their ability to persist in a dormant, metabolically inert state. An alternative possibility, supported by experimental data, is that microorganisms in frozen matrices are able to sustain a level of metabolic function that is sufficient for cellular repair and maintenance. To examine this experimentally, frozen populations of Psychrobacter arcticus 273-4 were exposed to ionizing radiation (IR) to simulate the damage incurred from natural background IR sources in the permafrost environment from over ∼225 kiloyears (ky). High-molecular-weight DNA was fragmented by exposure to 450 Gy of IR, which introduced an average of 16 double-strand breaks (DSBs) per chromosome. During incubation at -15°C for 505 days, P. arcticus repaired DNA DSBs in the absence of net growth. Based on the time frame for the assembly of genomic fragments by P. arcticus, the rate of DNA DSB repair was estimated at 7 to 10 DSBs year(-1) under the conditions tested. Our results provide direct evidence for the repair of DNA lesions, extending the range of complex biochemical reactions known to occur in bacteria at frozen temperatures. Provided that sufficient energy and nutrient sources are available, a functional DNA repair mechanism would allow cells to maintain genome integrity and augment microbial survival in icy terrestrial or extraterrestrial environments.

摘要

微生物在古代冰川冰和永久冻土中的存活归因于它们以休眠、代谢惰性状态持续存在的能力。实验数据支持的另一种可能性是,冷冻基质中的微生物能够维持足以进行细胞修复和维持的代谢功能水平。为了对此进行实验研究,将嗜冷北极杆菌273-4的冷冻菌群暴露于电离辐射(IR)下,以模拟约22.5万年以来永久冻土环境中天然背景IR源造成的损伤。通过暴露于450 Gy的IR使高分子量DNA断裂,平均每条染色体引入16个双链断裂(DSB)。在-15°C下孵育505天期间,嗜冷北极杆菌在无净生长的情况下修复了DNA双链断裂。根据嗜冷北极杆菌组装基因组片段的时间框架,在所测试的条件下,DNA双链断裂的修复速率估计为每年7至10个双链断裂。我们的结果为DNA损伤的修复提供了直接证据,扩展了已知在冷冻温度下细菌中发生的复杂生化反应的范围。如果有足够的能量和营养源,功能性DNA修复机制将使细胞能够维持基因组完整性并提高微生物在冰冷陆地或外星环境中的存活率。

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