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寄生虫和其媒介的膜联蛋白的全基因组分析。

A genome-wide analysis of annexins from parasitic organisms and their vectors.

机构信息

1] Centre for Biodiscovery and Molecular Development of Therapeutics, Queensland Tropical Health Alliance, James Cook University, Cairns, Queensland, Australia [2].

出版信息

Sci Rep. 2013 Oct 11;3:2893. doi: 10.1038/srep02893.

Abstract

In this study, we conduct an in-depth analysis of annexin proteins from a diverse range of invertebrate taxa, including the major groups that contain the parasites and vector organisms that are harmful to humans and domestic animals. Using structure-based amino acid sequence alignments and phylogenetic analyses, we present a classification for this protein group and assign names to sequences with ambiguous annotations in public databases. Our analyses reveal six distinct annexin clades, and the mapping of genes encoding annexins to the genome of the human blood fluke Schistosoma mansoni supports the hypothesis of gene duplication as a major evolutionary event in annexin genesis. This study illuminates annexin diversity from a novel perspective using contemporary phylogenetic hypotheses of eukaryote evolution, and will aid the consolidation of annexin protein identities in public databases and provide a foundation for future functional analysis and characterisation of these proteins in parasites of socioeconomic importance.

摘要

在这项研究中,我们对来自多种无脊椎动物类群的膜联蛋白进行了深入分析,包括包含寄生虫和媒介生物的主要类群,这些寄生虫和媒介生物对人类和家畜有害。我们使用基于结构的氨基酸序列比对和系统发育分析,为该蛋白家族进行了分类,并为公共数据库中注释不明确的序列分配了名称。我们的分析揭示了六个不同的膜联蛋白分支,并且将编码膜联蛋白的基因映射到人类血吸虫 Schistosoma mansoni 的基因组上,支持了基因复制是膜联蛋白起源的主要进化事件的假说。本研究使用当代真核生物进化的系统发育假说从新的角度阐明了膜联蛋白的多样性,将有助于整合公共数据库中膜联蛋白的身份,并为未来这些在具有社会经济重要性的寄生虫中的功能分析和特性研究提供基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2626/3795353/36e73f00d4dd/srep02893-f1.jpg

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