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饱和地下水环境中的微生物群落 I:异养细菌的分离和表征方法。

Microbial communities in the saturated groundwater environment I: Methods of isolation and characterization of heterotrophic bacteria.

机构信息

FB 2, Mikrobiologie, Universität Bremen, Leobener Str., D-2800, Bremen 33, FRG.

出版信息

Microb Ecol. 1988 Jul;16(1):17-29. doi: 10.1007/BF02097402.

DOI:10.1007/BF02097402
PMID:24201530
Abstract

In this paper we present a method of isolation and morphological and physiological characterization of groundwater bacteria based on numerical taxonomy and cluster analysis, and using a miniaturized test system (microtiter plates). Bacteria were isolated randomly on P-agar, and each strain was characterized in regard to 155 features. The media for biochemical differentiation are listed as well as methods of morphological discrimination. 246 strains of heterotrophic and oligotrophic bacteria, isolated from five water samples from different depths of the saturated groundwater area, were used for optimizing media and test reactions.

摘要

本文介绍了一种基于数值分类和聚类分析的地下水细菌的分离方法和形态学及生理学特性研究,并采用微型测试系统(微量滴定板)。在 P 琼脂上随机分离细菌,对每个菌株的 155 个特征进行了描述。本文列出了生化分化的培养基以及形态鉴别方法。从饱和地下水区域不同深度的 5 个水样中分离出 246 株异养菌和寡养菌,用于优化培养基和测试反应。

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Microb Ecol. 1988 Jul;16(1):17-29. doi: 10.1007/BF02097402.
2
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引用本文的文献

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Some special problems in the determination of viable counts of groundwater microorganisms.地下水微生物活菌数测定中的一些特殊问题。
Microb Ecol. 1988 Jul;16(1):99-113. doi: 10.1007/BF02097408.
2
Microbial communities in the saturated groundwater environment II: Diversity of bacterial communities in a Pleistocene sand aquifer and their in vitro activities.饱和地下水环境中的微生物群落 II:更新世砂含水层中细菌群落的多样性及其体外活性。
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Comparison of bacteria from deep subsurface sediment and adjacent groundwater.

本文引用的文献

1
Statistical sampling of bacterial strains and its use in bacterial diversity measurement.细菌菌株的统计抽样及其在细菌多样性测量中的应用。
Microb Ecol. 1982 Jun;8(1):61-9. doi: 10.1007/BF02011462.
2
Microbial communities in the saturated groundwater environment II: Diversity of bacterial communities in a Pleistocene sand aquifer and their in vitro activities.饱和地下水环境中的微生物群落 II:更新世砂含水层中细菌群落的多样性及其体外活性。
Microb Ecol. 1988 Jul;16(1):31-48. doi: 10.1007/BF02097403.
3
Studies on a New Oxalate-Decomposing Bacterium, Vibrio oxaliticus.
深部地下沉积物与相邻地下水的细菌比较。
Microb Ecol. 1991 Dec;22(1):293-304. doi: 10.1007/BF02540231.
4
Microbiological characterization of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria.受污染燃油场地的微生物特性分析,包括异养水和土壤细菌的数值鉴定。
Microb Ecol. 1991 Dec;21(1):227-51. doi: 10.1007/BF02539156.
5
Dispersal dynamics of groundwater bacteria.地下水细菌的扩散动态。
Microb Ecol. 1991 Dec;21(1):49-72. doi: 10.1007/BF02539144.
6
Density, activity, and diversity of bacteria indigenous to a karstic aquifer.岩溶含水层中土著细菌的密度、活性和多样性。
Microb Ecol. 1994 Jul;28(1):79-99. doi: 10.1007/BF00170249.
7
Characterization of chemoheterotrophic bacteria associated with the in situ bioremediation of a waste-oil contaminated site.与原位生物修复废油污染场地相关的化能异养菌的特性。
Microb Ecol. 1993 Sep;26(2):161-88. doi: 10.1007/BF00177050.
8
Characterization of the microbiology within a 21 m(3)section of rock from the deep subsurface.对深地下 21 立方米岩石段内微生物的特性进行描述。
Microb Ecol. 1993 Sep;26(2):145-59. doi: 10.1007/BF00177049.
9
Biodegradation of trichloroethylene and toluene by indigenous microbial populations in vadose sediments.在非饱和沉积物中土著微生物种群对三氯乙烯和甲苯的生物降解。
Microb Ecol. 1995 May;29(3):311-25. doi: 10.1007/BF00164893.
10
Production of lignocellulose-degrading enzymes and changes in soil bacterial communities during the growth of Pleurotus ostreatus in soil with different carbon content.不同碳含量土壤中平菇生长期间木质纤维素降解酶的产生及土壤细菌群落的变化
Folia Microbiol (Praha). 2006;51(6):579-90. doi: 10.1007/BF02931623.
新型草酸盐分解细菌——草酸弧菌的研究
J Bacteriol. 1948 Mar;55(3):359-68. doi: 10.1128/jb.55.3.359-368.1948.
4
Urea Decomposition as a Means of Differentiating Proteus and Paracolon Cultures from Each Other and from Salmonella and Shigella Types.尿素分解作为区分变形杆菌和副大肠杆菌培养物以及与沙门氏菌和志贺氏菌类型相区别的一种方法。
J Bacteriol. 1946 Oct;52(4):461-6. doi: 10.1128/jb.52.4.461-466.1946.
5
Factors Influencing the Reduction of Nitrates and Nitrites by Bacteria in Semisolid Media.半固体培养基中细菌对硝酸盐和亚硝酸盐还原的影响因素
J Bacteriol. 1932 Oct;24(4):273-81. doi: 10.1128/jb.24.4.273-281.1932.
6
Utilization of the Salts of Organic Acids by the Colon-Aerogenes Group.结肠-产气杆菌属对有机酸的盐类的利用
J Bacteriol. 1923 Sep;8(5):493-520. doi: 10.1128/jb.8.5.493-520.1923.
7
The rapid detection of lactose fermentation in paracolon organisms by the demonstration of beta-D-galactosidase.通过β-D-半乳糖苷酶的检测快速鉴定副结肠菌中的乳糖发酵情况。
J Med Lab Technol. 1962 Jan;19:21-5.
8
Simplified tests for some amino acid decarboxylases and for the arginine dihydrolase system.一些氨基酸脱羧酶和精氨酸双水解酶系统的简化检测方法。
Acta Pathol Microbiol Scand. 1955;36(2):158-72. doi: 10.1111/j.1699-0463.1955.tb04583.x.
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BIOLOGY OF BUDDING BACTERIA. II. GROWTH AND NUTRITION OF HYPHOMICROBIUM SPP.芽殖细菌生物学。II. 生丝微菌属的生长与营养
Arch Mikrobiol. 1964 Jun 26;48:358-67. doi: 10.1007/BF00405979.
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THE PHYSIOLOGICAL CHARACTERS AND FLAGELLAR ARRANGEMENT OF MOTILE HOMOFERMENTATIVE LACTOBACILLI.运动性同型发酵乳酸菌的生理特性及鞭毛排列
J Gen Microbiol. 1964 Jun;35:519-26. doi: 10.1099/00221287-35-3-519.