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热而脆:嗜热古菌 Sulfolobus solfataricus 中的 CRISPR-Cas 系统。

Hot and crispy: CRISPR-Cas systems in the hyperthermophile Sulfolobus solfataricus.

机构信息

*Biomedical Sciences Research Complex, University of St Andrews, Fife KY16 9ST, U.K.

出版信息

Biochem Soc Trans. 2013 Dec;41(6):1422-6. doi: 10.1042/BST20130031.

Abstract

The CRISPR (clustered regularly interspaced short palindromic repeats) and Cas (CRISPR-associated) genes are widely spread in bacteria and archaea, representing an intracellular defence system against invading viruses and plasmids. In the system, fragments from foreign DNA are captured and integrated into the host genome at the CRISPR locus. The locus is transcribed and the resulting RNAs are processed by Cas6 into small crRNAs (CRISPR RNAs) that guide a variety of effector complexes to degrade the invading genetic elements. Many bacteria and archaea have one major type of effector complex. However, Sulfolobus solfataricus strain P2 has six CRISPR loci with two families of repeats, four cas6 genes and three different types of effector complex. These features make S. solfataricus an important model for studying CRISPR-Cas systems. In the present article, we review our current understanding of crRNA biogenesis and its effector complexes, subtype I-A and subtype III-B, in S. solfataricus. We also discuss the differences in terms of mechanisms between the subtype III-B systems in S. solfataricus and Pyrococcus furiosus.

摘要

CRISPR(成簇规律间隔短回文重复)和 Cas(CRISPR 相关)基因广泛存在于细菌和古菌中,是一种针对入侵病毒和质粒的细胞内防御系统。在该系统中,外源 DNA 片段被捕获并整合到宿主基因组的 CRISPR 基因座上。该基因座被转录,产生的 RNA 被 Cas6 加工成小的 crRNA(CRISPR RNA),引导各种效应复合物降解入侵的遗传元件。许多细菌和古菌只有一种主要的效应复合物。然而,嗜热硫化叶菌 P2 株有六个 CRISPR 基因座,有两种重复家族、四个 cas6 基因和三种不同类型的效应复合物。这些特征使嗜热硫化叶菌成为研究 CRISPR-Cas 系统的重要模型。本文综述了我们目前对嗜热硫化叶菌 crRNA 生物发生及其效应复合物,即 I 型-A 和 III 型-B 的认识,还讨论了嗜热硫化叶菌和 Pyrococcus furiosus 中 III 型-B 系统在机制上的差异。

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