Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, Republic of Korea.
Agricultural Microbiology Division, National Academy of Agricultural Science, Rural Development Administration, Suwon, Republic of Korea.
Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):882-886. doi: 10.1099/ijs.0.058412-0. Epub 2013 Nov 22.
A bacterial strain, ABC02-12(T), was isolated from spent mushroom compost, a waste product of button mushroom cultivation. Cells of the strain were Gram-stain-negative, catalase- and oxidase-positive, non-spore-forming, aerobic flagellated rods. Optimum growth occurred at 28 °C and pH 7.0. 16S rRNA gene sequence analysis showed that strain ABC02-12(T) shared the highest sequence similarities with Paenalcaligenes hominis CCUG 53761A(T) (96.0 %), Alcaligenes faecalis subsp. parafaecalis G(T) (95.7 %), Alcaligenes faecalis subsp. faecalis IAM 12369(T) (95.4 %) and Pusillimonas noertemannii BN9(T) (95.3 %). According to the phylogenetic tree, strain ABC02-12(T) formed a robust cluster with Paenalcaligenes hominis CCUG 53761A(T) and Paenalcaligenes hermetiae KBL009(T). The quinone system was ubiquinone Q-8 with minor amounts of Q-7. The major fatty acids (>5 % of total fatty acids) were C16 : 0, C16 : 1ω6c and/or C16 : 1ω7c (summed feature 3), C18 : 1ω7c and/or C18 : 1ω6c (summed feature 8), C17 : 0 cyclo, and iso-C16 : 1 I, C14 : 0 3-OH and/or an unknown fatty acid (summed feature 2). The polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and an unknown aminolipid. Putrescine was the principal polyamine, with small amounts of 2-hydroxyputrescine and cadaverine. On the basis of the evidence presented in this study, strain ABC02-12(T) is a representative of a novel species within the genus Paenalcaligenes, for which the name Paenalcaligenes suwonensis sp. nov. is proposed. The type strain is ABC02-12(T) ( = KACC 16537(T) = NBRC 108927(T)).
一株细菌菌株,ABC02-12(T),从废弃的蘑菇堆肥中分离出来,这是一种纽扣蘑菇种植的废物。该菌株的细胞革兰氏染色阴性,过氧化氢酶和氧化酶阳性,不形成孢子,需氧鞭毛杆。最适生长温度为 28°C,pH 值为 7.0。16S rRNA 基因序列分析表明,菌株 ABC02-12(T)与 Paenalcaligenes hominis CCUG 53761A(T)(96.0%)、Alcaligenes faecalis subsp. parafaecalis G(T)(95.7%)、Alcaligenes faecalis subsp. faecalis IAM 12369(T)(95.4%)和 Pusillimonas noertemannii BN9(T)(95.3%)的相似度最高。根据系统发育树,菌株 ABC02-12(T)与 Paenalcaligenes hominis CCUG 53761A(T)和 Paenalcaligenes hermetiae KBL009(T)形成了一个稳健的聚类。醌类系统是泛醌 Q-8,还有少量的 Q-7。主要脂肪酸(占总脂肪酸的>5%)为 C16:0、C16:1ω6c 和/或 C16:1ω7c(特征 3 总和)、C18:1ω7c 和/或 C18:1ω6c(特征 8 总和)、C17:0 环和 iso-C16:1 I、C14:0 3-OH 和/或未知脂肪酸(特征 2 总和)。极性脂类为磷脂酰乙醇胺、磷脂酰甘油、双磷脂酰甘油和一种未知的氨基脂类。腐胺是主要的聚胺,还有少量的 2-羟腐胺和尸胺。根据本研究提供的证据,菌株 ABC02-12(T)是 Paenalcaligenes 属中新种的代表,建议将其命名为 Paenalcaligenes suwonensis sp. nov.。模式菌株为 ABC02-12(T)( = KACC 16537(T) = NBRC 108927(T))。