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基于发夹型适体 DNA zyme 探针的无标记和灵敏可视化检测细胞因子的靶触发二次扩增。

Target-triggered quadratic amplification for label-free and sensitive visual detection of cytokines based on hairpin aptamer DNAzyme probes.

机构信息

Key Laboratory on Luminescence and Real-Time Analysis, Ministry of Education, School of Chemistry and Chemical Engineering, Southwest University , Chongqing 400715, People's Republic of China.

出版信息

Anal Chem. 2014 Jan 7;86(1):953-8. doi: 10.1021/ac403682c. Epub 2013 Dec 13.

Abstract

The employment of DNAzyme probes for visual biodetections has received increasing interest recently due to the simple nature of this type of assay. However, achieving high sensitivity and detecting targets beyond nucleic acids remain two major challenges in DNAzyme-based visual detections. In this work, based on a new quadratic amplification strategy, we developed a sensitive and visual detection method for cytokines by using hairpin aptamer DNAzyme probes. The target cytokine, interferon γ (IFN-γ), associates with the aptamer sequences and unfolds the hairpin structure of the probes, leading to simultaneous recycling of the target IFN-γ (assisted by Bst-polymerase) and the DNA sequences (aided by λ exonuclease) to achieve quadratic amplification. This quadratic amplification results in the generation of numerous peroxidase-mimicking DNAzymes, which cause significantly intensified color change of the probe solution for highly sensitive detection of IFN-γ by the naked eye down to 50 pM. The proposed visual sensing method shows also high selectivity toward the target IFN-γ and can be performed in homogeneous solutions with using completely unmodified, synthetic aptamer DNAzyme probes. These distinct advantages of our developed assay protocol make it a potential platform for detecting various types of biomolecules with careful probe designs.

摘要

由于这种类型的测定方法简单,因此最近人们对 DNA 酶探针用于可视化生物检测的应用越来越感兴趣。然而,实现高灵敏度和检测超出核酸的靶标仍然是基于 DNA 酶的可视化检测的两个主要挑战。在这项工作中,我们基于一种新的二次放大策略,开发了一种基于发夹适体 DNA 酶探针的用于细胞因子的灵敏可视化检测方法。目标细胞因子干扰素 γ(IFN-γ)与适体序列结合并展开探针的发夹结构,导致目标 IFN-γ(由 Bst-聚合酶辅助)和 DNA 序列(由 λ 外切酶辅助)同时进行循环,从而实现二次放大。这种二次放大导致产生了许多过氧化物酶模拟 DNA 酶,这使得探针溶液的颜色变化非常明显,通过肉眼可以检测到低至 50 pM 的 IFN-γ,实现了高灵敏度检测。所提出的可视化传感方法对目标 IFN-γ表现出很高的选择性,并且可以在均相溶液中使用完全未经修饰的合成适体 DNA 酶探针进行。我们开发的检测方案具有这些明显的优势,使其成为一种具有探针设计的潜力平台,用于检测各种类型的生物分子。

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