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工业主力军地衣芽孢杆菌对渗透挑战的应激反应。

Stress responses of the industrial workhorse Bacillus licheniformis to osmotic challenges.

作者信息

Schroeter Rebecca, Hoffmann Tamara, Voigt Birgit, Meyer Hanna, Bleisteiner Monika, Muntel Jan, Jürgen Britta, Albrecht Dirk, Becher Dörte, Lalk Michael, Evers Stefan, Bongaerts Johannes, Maurer Karl-Heinz, Putzer Harald, Hecker Michael, Schweder Thomas, Bremer Erhard

机构信息

Pharmaceutical Biotechnology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany.

Laboratory for Microbiology, Department of Biology, University Marburg, Marburg, Germany ; LOEWE-Center for Synthetic Microbiology, University Marburg, Marburg, Germany.

出版信息

PLoS One. 2013 Nov 15;8(11):e80956. doi: 10.1371/journal.pone.0080956. eCollection 2013.

Abstract

The Gram-positive endospore-forming bacterium Bacillus licheniformis can be found widely in nature and it is exploited in industrial processes for the manufacturing of antibiotics, specialty chemicals, and enzymes. Both in its varied natural habitats and in industrial settings, B. licheniformis cells will be exposed to increases in the external osmolarity, conditions that trigger water efflux, impair turgor, cause the cessation of growth, and negatively affect the productivity of cell factories in biotechnological processes. We have taken here both systems-wide and targeted physiological approaches to unravel the core of the osmostress responses of B. licheniformis. Cells were suddenly subjected to an osmotic upshift of considerable magnitude (with 1 M NaCl), and their transcriptional profile was then recorded in a time-resolved fashion on a genome-wide scale. A bioinformatics cluster analysis was used to group the osmotically up-regulated genes into categories that are functionally associated with the synthesis and import of osmostress-relieving compounds (compatible solutes), the SigB-controlled general stress response, and genes whose functional annotation suggests that salt stress triggers secondary oxidative stress responses in B. licheniformis. The data set focusing on the transcriptional profile of B. licheniformis was enriched by proteomics aimed at identifying those proteins that were accumulated by the cells through increased biosynthesis in response to osmotic stress. Furthermore, these global approaches were augmented by a set of experiments that addressed the synthesis of the compatible solutes proline and glycine betaine and assessed the growth-enhancing effects of various osmoprotectants. Combined, our data provide a blueprint of the cellular adjustment processes of B. licheniformis to both sudden and sustained osmotic stress.

摘要

革兰氏阳性产芽孢细菌地衣芽孢杆菌在自然界中广泛存在,可用于抗生素、特种化学品和酶的工业生产。无论是在其多样的自然栖息地还是工业环境中,地衣芽孢杆菌细胞都会面临外部渗透压升高的情况,这种情况会引发水分外流、损害膨压、导致生长停止,并对生物技术过程中细胞工厂的生产力产生负面影响。我们在这里采用了全系统和有针对性的生理学方法来揭示地衣芽孢杆菌渗透应激反应的核心。使细胞突然受到相当大程度的渗透压升高(加入1 M NaCl),然后在全基因组范围内以时间分辨的方式记录其转录谱。使用生物信息学聚类分析将渗透压上调的基因分为与缓解渗透应激的化合物(相容性溶质)的合成和导入、SigB控制的一般应激反应以及功能注释表明盐胁迫在地衣芽孢杆菌中触发次级氧化应激反应的基因相关的类别。通过蛋白质组学丰富了关注地衣芽孢杆菌转录谱的数据集,旨在鉴定细胞通过响应渗透应激增加生物合成而积累的那些蛋白质。此外,这些全局方法通过一系列实验得到加强,这些实验涉及相容性溶质脯氨酸和甘氨酸甜菜碱的合成,并评估了各种渗透保护剂的生长促进作用。综合起来,我们的数据提供了地衣芽孢杆菌对突然和持续渗透应激的细胞调节过程的蓝图。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9610/3858371/9bb2bfd4bc17/pone.0080956.g001.jpg

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