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由S,S-四嗪光化学触发剂约束的富含丙氨酸的α-螺旋肽的设计与合成:一种片段连接方法。

The design and synthesis of alanine-rich α-helical peptides constrained by an S,S-tetrazine photochemical trigger: a fragment union approach.

作者信息

Courter Joel R, Abdo Mohannad, Brown Stephen P, Tucker Matthew J, Hochstrasser Robin M, Smith Amos B

机构信息

Department of Chemistry, University of Pennsylvania , Philadelphia, Pennsylvania 19104, United States.

出版信息

J Org Chem. 2014 Jan 17;79(2):759-68. doi: 10.1021/jo402680v. Epub 2013 Dec 20.

DOI:10.1021/jo402680v
PMID:24359446
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3916828/
Abstract

The design and synthesis of alanine-rich α-helical peptides constrained in a partially unfolded state by incorporation of the S,S-tetrazine phototrigger has been achieved, permitting, upon photochemical release, observation by 2D-IR spectroscopy of the subnanosecond conformational dynamics that govern the early steps associated with α-helix formation. Solid-phase peptide synthesis was employed to elaborate the requisite fragments, with full peptide construction via solution-phase fragment condensation. The fragment union tactic was also employed to construct (13)C═(18)O isotopically edited amides to permit direct observation of conformational motion at or near specific peptide bonds.

摘要

通过引入S,S-四嗪光触发剂,实现了设计和合成处于部分解折叠状态的富含丙氨酸的α-螺旋肽,在光化学释放后,可通过二维红外光谱观察亚纳秒级构象动力学,这些动力学控制着与α-螺旋形成相关的早期步骤。采用固相肽合成法制备所需片段,并通过溶液相片段缩合进行全肽构建。还采用片段连接策略构建了(13)C═(18)O同位素编辑的酰胺,以直接观察特定肽键处或其附近的构象运动。

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本文引用的文献

1
Nonequilibrium dynamics of helix reorganization observed by transient 2D IR spectroscopy.瞬态 2DIR 光谱法观察到的螺旋重组的非平衡动力学。
Proc Natl Acad Sci U S A. 2013 Oct 22;110(43):17314-9. doi: 10.1073/pnas.1311876110. Epub 2013 Oct 8.
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Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography.皮秒 X 射线晶体学直观呈现光激活黄色蛋白中的体积守恒顺反异构途径。
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Measurement of energy landscape roughness of folded and unfolded proteins.折叠和未折叠蛋白质的能量景观粗糙度的测量。
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Chemical physics of protein folding.蛋白质折叠的化学物理学
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Protein folding at atomic resolution: analysis of autonomously folding supersecondary structure motifs by nuclear magnetic resonance.原子分辨率下的蛋白质折叠:通过核磁共振对自主折叠超二级结构基序的分析。
Methods Mol Biol. 2013;932:205-18. doi: 10.1007/978-1-62703-065-6_13.
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Org Lett. 2012 Jul 6;14(13):3518-21. doi: 10.1021/ol301490h. Epub 2012 Jun 26.
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Di-Cysteine S,S-Tetrazine: A Potential Ultra-fast Photochemical Trigger to Explore the Early Events of Peptide/Protein Folding.二半胱氨酸 S,S-四嗪:一种用于探索肽/蛋白质折叠早期事件的潜在超快速光化学触发剂。
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