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酶可能具有较强的低势垒氢键。

Strong, low-barrier hydrogen bonds may be available to enzymes.

机构信息

Department of Chemistry, Johns Hopkins University , Baltimore, Maryland 21218, United States.

出版信息

Biochemistry. 2014 Jan 21;53(2):344-9. doi: 10.1021/bi4014566. Epub 2014 Jan 6.

DOI:10.1021/bi4014566
PMID:24359447
Abstract

The debate over the possible role of strong, low-barrier hydrogen bonds in stabilizing reaction intermediates at enzyme active sites has taken place in the absence of an awareness of the upper limits to the strengths of low-barrier hydrogen bonds involving amino acid side chains. Hydrogen bonds exhibit their maximal strengths in isolation, i.e., in the gas phase. In this work, we measured the ionic hydrogen bond strengths of three enzymatically relevant model systems in the gas phase using anion photoelectron spectroscopy; we calibrated these against the hydrogen bond strength of HF2(-), measured using the same technique, and we compared our results with other gas-phase experimental data. The model systems studied here, the formate-formic acid, acetate-acetic acid, and imidazolide-imidazole anionic complexes, all exhibit very strong hydrogen bonds, whose strengths compare favorably with that of the hydrogen bifluoride anion, the strongest known hydrogen bond. The hydrogen bond strengths of these gas-phase complexes are stronger than those typically estimated as being required to stabilize enzymatic intermediates. If there were to be enzyme active site environments that can facilitate the retention of a significant fraction of the strengths of these isolated (gas-phase), hydrogen bonded couples, then low-barrier hydrogen bonding interactions might well play important roles in enzymatic catalysis.

摘要

关于强、低势垒氢键在稳定酶活性部位反应中间体方面可能发挥的作用的争论,一直以来都没有意识到涉及氨基酸侧链的低势垒氢键的强度上限。氢键在隔离状态下,即在气相中,表现出其最大强度。在这项工作中,我们使用阴离子光电子能谱测量了气相中三个与酶相关的模型系统的离子氢键强度;我们将这些强度与使用相同技术测量的 HF2(-)的氢键强度进行了校准,并将我们的结果与其他气相实验数据进行了比较。我们在这里研究的模型系统,甲酸(formate)-甲酸(formic acid)、乙酸(acetate)-乙酸(acetic acid)和咪唑啉盐(imidazolide)-咪唑(imidazole)阴离子配合物,都表现出非常强的氢键,其强度可与最强的已知氢键氢二氟化物阴离子(HF2(-))相媲美。这些气相配合物的氢键强度强于通常估计的稳定酶中间物所需的强度。如果存在能够促进这些分离(气相)氢键对强度的显著部分保留的酶活性部位环境,那么低势垒氢键相互作用很可能在酶催化中发挥重要作用。

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