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从切萨皮克湾河口分离出的聚球藻属菌株CB0101的基因组序列草图

Draft Genome Sequence of Synechococcus sp. Strain CB0101, Isolated From the Chesapeake Bay Estuary.

作者信息

Marsan David, Wommack K Eric, Ravel Jacques, Chen Feng

机构信息

The Institute of Marine and Environmental Technology, University of Maryland Center for Environmental Science, Baltimore, Maryland, USA.

出版信息

Genome Announc. 2014 Jan 9;2(1):e01111-13. doi: 10.1128/genomeA.01111-13.

DOI:10.1128/genomeA.01111-13
PMID:24407633
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3886946/
Abstract

Here, we report the draft genome sequence of the estuarine Synechococcus sp. strain CB0101. The genomics information of this strain will facilitate the study of the poorly understood Synechococcus subcluster 5.2 and how this strain is capable of thriving in a dynamic estuarine system, such as the Chesapeake Bay.

摘要

在此,我们报告河口聚球藻属(Synechococcus sp.)菌株CB0101的基因组序列草图。该菌株的基因组学信息将有助于对了解较少的聚球藻亚群5.2以及该菌株如何能够在动态河口系统(如切萨皮克湾)中蓬勃生长的研究。

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Draft Genome Sequence of Synechococcus sp. Strain CB0101, Isolated From the Chesapeake Bay Estuary.从切萨皮克湾河口分离出的聚球藻属菌株CB0101的基因组序列草图
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本文引用的文献

1
Novel lineages of Prochlorococcus and Synechococcus in the global oceans.海洋中新型聚球藻和聚球藻的进化枝。
ISME J. 2012 Feb;6(2):285-97. doi: 10.1038/ismej.2011.106. Epub 2011 Sep 29.
2
Abundance and distribution of Synechococcus spp. and cyanophages in the Chesapeake Bay.切萨皮克湾中聚球藻属和蓝藻噬菌体的丰度和分布。
Appl Environ Microbiol. 2011 Nov;77(21):7459-68. doi: 10.1128/AEM.00267-11. Epub 2011 Aug 5.
3
The JCVI standard operating procedure for annotating prokaryotic metagenomic shotgun sequencing data.用于注释原核生物宏基因组鸟枪法测序数据的JCVI标准操作程序。
Stand Genomic Sci. 2010 Mar 30;2(2):229-37. doi: 10.4056/sigs.651139.
4
Prevalence of highly host-specific cyanophages in the estuarine environment.河口环境中高度宿主特异性蓝藻噬菌体的流行情况。
Environ Microbiol. 2008 Feb;10(2):300-12. doi: 10.1111/j.1462-2920.2007.01452.x. Epub 2007 Sep 28.
5
Diverse and unique picocyanobacteria in Chesapeake Bay, revealed by 16S-23S rRNA internal transcribed spacer sequences.通过16S - 23S rRNA内部转录间隔区序列揭示的切萨皮克湾多样且独特的蓝细菌
Appl Environ Microbiol. 2006 Mar;72(3):2239-43. doi: 10.1128/AEM.72.3.2239-2243.2006.