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利用 GPS 项圈个体在野生种群中的时间和空间接触结构来构建疾病模型。

Informing disease models with temporal and spatial contact structure among GPS-collared individuals in wild populations.

机构信息

Department of Environmental and Forest Biology, State University of New York College of Environmental Science and Forestry, Syracuse, New York, United States of America.

出版信息

PLoS One. 2014 Jan 7;9(1):e84368. doi: 10.1371/journal.pone.0084368. eCollection 2014.

DOI:10.1371/journal.pone.0084368
PMID:24409293
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3883651/
Abstract

Contacts between hosts are essential for transmission of many infectious agents. Understanding how contacts, and thus transmission rates, occur in space and time is critical to effectively responding to disease outbreaks in free-ranging animal populations. Contacts between animals in the wild are often difficult to observe or measure directly. Instead, one must infer contacts from metrics such as proximity in space and time. Our objective was to examine how contacts between white-tailed deer (Odocoileus virginianus) vary in space and among seasons. We used GPS movement data from 71 deer in central New York State to quantify potential direct contacts between deer and indirect overlap in space use across time and space. Daily probabilities of direct contact decreased from winter (0.05-0.14), to low levels post-parturition through summer (0.00-0.02), and increased during the rut to winter levels. The cumulative distribution for the spatial structure of direct and indirect contact probabilities around a hypothetical point of occurrence increased rapidly with distance for deer pairs separated by 1,000 m-7,000 m. Ninety-five percent of the probabilities of direct contact occurred among deer pairs within 8,500 m of one another, and 99% within 10,900 m. Probabilities of indirect contact accumulated across greater spatial extents: 95% at 11,900 m and 99% at 49,000 m. Contacts were spatially consistent across seasons, indicating that although contact rates differ seasonally, they occur proportionally across similar landscape extents. Distributions of contact probabilities across space can inform management decisions for assessing risk and allocating resources in response.

摘要

宿主之间的接触对于许多传染病原体的传播至关重要。了解接触情况(因此也包括传播率)如何在空间和时间中发生,对于有效应对自由放养动物种群中的疾病爆发至关重要。野生动物之间的接触通常难以直接观察或测量。相反,人们必须从空间和时间上的接近度等指标来推断接触情况。我们的目的是研究白尾鹿(Odocoileus virginianus)之间的接触在空间和季节上的变化。我们使用来自纽约州中部 71 只鹿的 GPS 运动数据,量化了鹿之间潜在的直接接触以及时间和空间上的间接空间利用重叠。直接接触的每日概率从冬季(0.05-0.14)下降到产后至夏季(0.00-0.02)的低水平,然后在发情期增加到冬季水平。在一个假设发生点周围,直接和间接接触概率的空间结构的累积分布随着距离的增加而迅速增加,对于相隔 1000 米至 7000 米的鹿对来说。95%的直接接触概率发生在彼此相距 8500 米以内的鹿对之间,99%发生在 10900 米以内。间接接触的概率在更大的空间范围内积累:95%在 11900 米,99%在 49000 米。接触在季节之间具有空间一致性,这表明尽管接触率在季节上有所不同,但它们在相似的景观范围内成比例地发生。接触概率在空间上的分布可以为评估风险和分配资源以做出响应的管理决策提供信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a975/3883651/5c1a747ea8cc/pone.0084368.g009.jpg
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