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调控蛋白降解:蛋白酶体作用的动态快照。

Regulated protein turnover: snapshots of the proteasome in action.

机构信息

Department of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208, USA.

1] Department of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208, USA. [2] Department of Chemistry and Biochemistry, The University of Texas at Austin, Austin, Texas 78712, USA.

出版信息

Nat Rev Mol Cell Biol. 2014 Feb;15(2):122-33. doi: 10.1038/nrm3741.

Abstract

The ubiquitin proteasome system (UPS) is the main ATP-dependent protein degradation pathway in the cytosol and nucleus of eukaryotic cells. At its centre is the 26S proteasome, which degrades regulatory proteins and misfolded or damaged proteins. In a major breakthrough, several groups have determined high-resolution structures of the entire 26S proteasome particle in different nucleotide conditions and with and without substrate using cryo-electron microscopy combined with other techniques. These structures provide some surprising insights into the functional mechanism of the proteasome and will give invaluable guidance for genetic and biochemical studies of this key regulatory system.

摘要

泛素蛋白酶体系统 (UPS) 是真核细胞细胞质和细胞核中主要的依赖于 ATP 的蛋白质降解途径。其核心是 26S 蛋白酶体,它可降解调节蛋白和错误折叠或受损的蛋白质。在一项重大突破中,几个研究小组使用冷冻电镜结合其他技术,在不同核苷酸条件下以及有和没有底物的情况下,确定了整个 26S 蛋白酶体颗粒的高分辨率结构。这些结构为蛋白酶体的功能机制提供了一些令人惊讶的见解,并将为该关键调节系统的遗传和生化研究提供宝贵的指导。

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本文引用的文献

1
The ClpXP protease unfolds substrates using a constant rate of pulling but different gears.
Cell. 2013 Oct 24;155(3):636-646. doi: 10.1016/j.cell.2013.09.022.
2
Reconstitution of the 26S proteasome reveals functional asymmetries in its AAA+ unfoldase.
Nat Struct Mol Biol. 2013 Oct;20(10):1164-72. doi: 10.1038/nsmb.2659. Epub 2013 Sep 8.
4
The ATP costs and time required to degrade ubiquitinated proteins by the 26 S proteasome.
J Biol Chem. 2013 Oct 4;288(40):29215-22. doi: 10.1074/jbc.M113.482570. Epub 2013 Aug 21.
5
Conformational switching of the 26S proteasome enables substrate degradation.
Nat Struct Mol Biol. 2013 Jul;20(7):781-8. doi: 10.1038/nsmb.2616. Epub 2013 Jun 16.
6
Localization of the regulatory particle subunit Sem1 in the 26S proteasome.
Biochem Biophys Res Commun. 2013 May 31;435(2):250-4. doi: 10.1016/j.bbrc.2013.04.069. Epub 2013 May 1.
7
Structure of the 26S proteasome with ATP-γS bound provides insights into the mechanism of nucleotide-dependent substrate translocation.
Proc Natl Acad Sci U S A. 2013 Apr 30;110(18):7264-9. doi: 10.1073/pnas.1305782110. Epub 2013 Apr 15.
8
The proteasome under the microscope: the regulatory particle in focus.
Curr Opin Struct Biol. 2013 Apr;23(2):243-51. doi: 10.1016/j.sbi.2013.02.004. Epub 2013 Mar 13.
9
Structural biology of the proteasome.
Annu Rev Biophys. 2013;42:29-49. doi: 10.1146/annurev-biophys-083012-130417. Epub 2013 Feb 13.
10
Bipartite determinants mediate an evolutionarily conserved interaction between Cdc48 and the 20S peptidase.
Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3327-32. doi: 10.1073/pnas.1300408110. Epub 2013 Feb 11.

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