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基于 DNA-PAINT 和 Exchange-PAINT 的多重 3D 细胞超分辨成像。

Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT.

机构信息

1] Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, Massachusetts, USA. [2] Department of Systems Biology, Harvard Medical School, Boston, Massachusetts, USA. [3].

1] Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, Massachusetts, USA. [2].

出版信息

Nat Methods. 2014 Mar;11(3):313-8. doi: 10.1038/nmeth.2835. Epub 2014 Feb 2.

DOI:10.1038/nmeth.2835
PMID:24487583
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4153392/
Abstract

Super-resolution fluorescence microscopy is a powerful tool for biological research, but obtaining multiplexed images for a large number of distinct target species remains challenging. Here we use the transient binding of short fluorescently labeled oligonucleotides (DNA-PAINT, a variation of point accumulation for imaging in nanoscale topography) for simple and easy-to-implement multiplexed super-resolution imaging that achieves sub-10-nm spatial resolution in vitro on synthetic DNA structures. We also report a multiplexing approach (Exchange-PAINT) that allows sequential imaging of multiple targets using only a single dye and a single laser source. We experimentally demonstrate ten-color super-resolution imaging in vitro on synthetic DNA structures as well as four-color two-dimensional (2D) imaging and three-color 3D imaging of proteins in fixed cells.

摘要

超分辨率荧光显微镜是生物学研究的有力工具,但获取大量不同目标物种的多路复用图像仍然具有挑战性。在这里,我们使用短荧光标记寡核苷酸(DNA-PAINT,点积累成像在纳米级形貌中的一种变体)的瞬时结合,实现了简单易用的多路复用超分辨率成像,在体外合成 DNA 结构上实现了小于 10nm 的空间分辨率。我们还报告了一种多路复用方法(Exchange-PAINT),该方法仅使用单个染料和单个激光源即可对多个目标进行顺序成像。我们在体外合成 DNA 结构上进行了十色超分辨率成像实验,并在固定细胞中进行了四色二维(2D)成像和三色 3D 成像。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/80ec528feb8a/nihms555422f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/c27bccffb733/nihms555422f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/2cc17bc0ee8e/nihms555422f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/fa170ba9d753/nihms555422f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/80ec528feb8a/nihms555422f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/c27bccffb733/nihms555422f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/2cc17bc0ee8e/nihms555422f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/fa170ba9d753/nihms555422f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/929a/4153392/80ec528feb8a/nihms555422f4.jpg

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J Am Chem Soc. 2013 Aug 21;135(33):12172-5. doi: 10.1021/ja403863a. Epub 2013 Aug 7.
2
In situ sequencing for RNA analysis in preserved tissue and cells.在保存的组织和细胞中进行 RNA 分析的原位测序。
Nat Methods. 2013 Sep;10(9):857-60. doi: 10.1038/nmeth.2563. Epub 2013 Jul 14.
3
Super-resolution fingerprinting detects chemical reactions and idiosyncrasies of single DNA pegboards.超分辨率指纹识别技术可检测单个 DNA 钉板的化学反应和特性。
一种用于长期DNA-PAINT成像的简单、超稳定且经济高效的氧气清除系统。
bioRxiv. 2025 Jul 18:2025.07.14.664726. doi: 10.1101/2025.07.14.664726.
4
Single-objective lattice light sheet microscopy with microfluidics for single-molecule super-resolution imaging of mammalian cells.用于哺乳动物细胞单分子超分辨率成像的带微流控的单目标晶格光片显微镜
bioRxiv. 2025 Jul 23:2025.07.18.665606. doi: 10.1101/2025.07.18.665606.
5
Cryosectioning-enhanced super-resolution microscopy for single-protein imaging across cells and tissues.用于跨细胞和组织的单蛋白成像的冷冻切片增强超分辨率显微镜技术。
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6
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Adv Intell Syst. 2025 Mar;7(3):2400521. doi: 10.1002/aisy.202400521. Epub 2024 Dec 25.
7
Ångström-resolution imaging of cell-surface glycans.细胞表面聚糖的埃分辨率成像。
Nat Nanotechnol. 2025 Jul 28. doi: 10.1038/s41565-025-01966-5.
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Elife. 2025 Jul 22;14:RP105225. doi: 10.7554/eLife.105225.
9
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J Neurochem. 2025 Jul;169(7):e70160. doi: 10.1111/jnc.70160.
10
Cellular optical imaging techniques: a dynamic advancing frontier.细胞光学成像技术:一个动态发展的前沿领域。
Sci China Life Sci. 2025 Jul 16. doi: 10.1007/s11427-024-2916-5.
Nano Lett. 2013 Feb 13;13(2):728-33. doi: 10.1021/nl304415b. Epub 2013 Jan 31.
4
Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes.用于使用寡核苷酸 FISH 探针可视化基因组的通用设计和合成平台。
Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21301-6. doi: 10.1073/pnas.1213818110. Epub 2012 Dec 11.
5
Ultrabright photoactivatable fluorophores created by reductive caging.通过还原笼蔽作用产生的超高亮光活化荧光团。
Nat Methods. 2012 Dec;9(12):1181-4. doi: 10.1038/nmeth.2214. Epub 2012 Oct 28.
6
Tug-of-war in motor protein ensembles revealed with a programmable DNA origami scaffold.利用可编程 DNA 折纸支架揭示马达蛋白组装体中的拔河比赛。
Science. 2012 Nov 2;338(6107):662-5. doi: 10.1126/science.1226734. Epub 2012 Oct 11.
7
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Nat Methods. 2012 Oct;9(10):938-9. doi: 10.1038/nmeth.2179.
8
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Nat Chem. 2012 Oct;4(10):832-9. doi: 10.1038/nchem.1451.
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Angew Chem Int Ed Engl. 2012 Sep 10;51(37):9292-6. doi: 10.1002/anie.201204304. Epub 2012 Aug 15.
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