Korean Collection for Type Cultures (KCTC), Biological Resource Center (BRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahangno, Yuseong-gu, Daejeon 305-806, Republic of Korea.
Marine Biotechnology Research Division, Korea Institute of Ocean Science & Technology, PO Box 29, Ansan 425-600, Republic of Korea.
Int J Syst Evol Microbiol. 2014 May;64(Pt 5):1622-1628. doi: 10.1099/ijs.0.058230-0. Epub 2014 Jan 31.
Two novel bacterial strains, GH2-4T and GH2-5, were isolated from mangrove soil near the seashore of Weno island in Chuuk state, Micronesia, and were characterized by a polyphasic approach. The two strains were strictly aerobic, Gram-staining-positive, motile, endospore-forming rods that were catalase- and oxidase-positive. Colonies were circular, convex, stringy and transparent yellowish (GH2-4T) or opaque whitish (GH2-5). The 16S rRNA gene sequences of the two isolates were identical. The most closely related strains in terms of 16S rRNA gene sequence similarity were Bacillus kochii WCC 4582T, B. horneckiae DSM 23495T, B. azotoformans LMG 9581T, B. cohnii DSM 6307T and B. halmapalus DSM 8723T (95.6, 95.4, 95.4, 95.2 and 95.2% similarity, respectively). The partial groEL sequence of strain GH2-4T was identical to that of strain GH2-5 and showed <85% similarity to those of the most closely related strains. The isolates grew at pH 5-12 (optimal growth at pH 9), at 10-40 °C (optimum 30-35 °C) and at 0-9% (w/v) NaCl (optimum 1-3% NaCl). The cell-wall peptidoglycan of strains GH2-4T and GH2-5 contained meso-diaminopimelic acid and cell-wall hydrolysates contained ribose as a major sugar. The DNA G+C content was 36 mol%, and DNA-DNA relatedness between the isolates and five related reference strains was 20-24%. Strain GH2-4T exhibited 81% DNA-DNA relatedness with strain GH2-5. The major cellular fatty acids of both strains were iso-C15:0, iso-C16:0, iso-C14:0 and anteiso-C15:0 and the predominant menaquinone was MK-7. On the basis of the evidence from this polyphasic study, strains GH2-4T and GH2-5 (=KCTC 33143=JCM 18995=DSM 27084) represent a novel species of the genus Bacillus, for which the name Bacillus solimangrovi sp. nov. is proposed; the type strain is GH2-4T (=KCTC 33142T=JCM 18994T=DSM 27083T).
两株新的细菌菌株 GH2-4T 和 GH2-5 是从密克罗尼西亚楚克州外岛温诺岛附近的滨海红树林土壤中分离出来的,并通过多相分析进行了特征描述。这两株菌都是严格需氧的革兰氏阳性、运动性、能形成芽孢的杆菌,过氧化氢酶和氧化酶均为阳性。菌落呈圆形、凸起、呈线状且呈透明的黄色(GH2-4T)或不透明的白色(GH2-5)。这两株菌的 16S rRNA 基因序列完全相同。根据 16S rRNA 基因序列相似性,最接近的菌株是 Bacillus kochii WCC 4582T、B. horneckiae DSM 23495T、B. azotoformans LMG 9581T、B. cohnii DSM 6307T 和 B. halmapalus DSM 8723T(相似度分别为 95.6%、95.4%、95.4%、95.2%和 95.2%)。菌株 GH2-4T 的部分 groEL 序列与菌株 GH2-5 完全相同,与最接近的菌株相似度<85%。这两株菌在 pH 5-12(最佳生长 pH 为 9)、10-40°C(最佳生长温度为 30-35°C)和 0-9%(w/v)NaCl(最佳生长 NaCl 浓度为 1-3%)的条件下均可生长。菌株 GH2-4T 和 GH2-5 的细胞壁肽聚糖含有 meso-二氨基庚二酸,细胞壁水解物含有核糖作为主要糖。DNA G+C 含量为 36 mol%,两株菌与 5 株相关参考菌株的 DNA-DNA 相关性为 20-24%。菌株 GH2-4T 与菌株 GH2-5 的 DNA-DNA 相关性为 81%。两株菌的主要细胞脂肪酸均为 iso-C15:0、iso-C16:0、iso-C14:0 和 anteiso-C15:0,主要menaquinone 为 MK-7。基于多相研究的证据,菌株 GH2-4T 和 GH2-5(=KCTC 33143=JCM 18995=DSM 27084)代表芽孢杆菌属的一个新种,命名为 Bacillus solimangrovi sp. nov.;模式菌株为 GH2-4T(=KCTC 33142T=JCM 18994T=DSM 27083T)。