Park Sooyeon, Park Ja-Min, Kang Chul-Hyung, Yoon Jung-Hoon
Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, South Korea.
Antonie Van Leeuwenhoek. 2014 Apr;105(4):723-30. doi: 10.1007/s10482-014-0127-2. Epub 2014 Feb 14.
A Gram-negative, aerobic, non-motile and ovoid or rod-shaped bacterial strain, designated YM-20(T), was isolated from a tidal flat of the Yellow Sea in South Korea. Strain YM-20(T) was found to grow optimally at 30 °C, at pH 7.0-8.0 and in the presence of 2.0-3.0 % (w/v) NaCl. Phylogenetic trees based on 16S rRNA gene sequences revealed that strain YM-20(T) clustered consistently with the type strains of 'Roseovarius marisflavi' and Roseovarius lutimaris, with which it exhibited 16S rRNA gene sequence similarities of 99.86 and 98.71 %, respectively. Strain YM-20(T) was found to contain Q-10 as the predominant ubiquinone and C18:1 ω7c as the predominant fatty acid. The major polar lipids of strain YM-20(T) were identified as phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, one unidentified aminolipid and one unidentified lipid. The DNA G+C content of strain YM-20(T) was determined to be 60.9 mol% and its DNA-DNA relatedness values with the type strains of 'R. marisflavi', R. lutimaris and Pelagicola litorisediminis were 53 ± 7.1, 22 ± 5.5 and 13 ± 4.7 %, respectively. The differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, revealed that strain YM-20(T) is separated from 'R. marisflavi', R. lutimaris, the other Roseovarius species and P. litorisediminis. On the basis of the data presented, strain YM-20(T) is considered to represent a novel species of the genus Roseovarius, for which the name Roseovarius gaetbuli sp. nov. is proposed. The type strain is YM-20(T) (= KCTC 32428(T) = CECT 8370(T)).
从韩国黄海潮滩分离出一株革兰氏阴性、需氧、无运动性、卵圆形或杆状的细菌菌株,命名为YM-20(T)。发现菌株YM-20(T)在30℃、pH 7.0 - 8.0以及2.0 - 3.0%(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列构建的系统发育树显示,菌株YM-20(T)始终与“海黄玫瑰杆菌(Roseovarius marisflavi)”和泥质玫瑰杆菌(Roseovarius lutimaris)的模式菌株聚类在一起,与之16S rRNA基因序列相似性分别为99.86%和98.71%。发现菌株YM-20(T)以Q-10作为主要泛醌,以C18:1 ω7c作为主要脂肪酸。菌株YM-20(T)的主要极性脂被鉴定为磷脂酰胆碱、磷脂酰甘油、磷脂酰乙醇胺、一种未鉴定的氨基脂和一种未鉴定的脂类。菌株YM-20(T)的DNA G+C含量测定为60.9 mol%,其与“海黄玫瑰杆菌”、泥质玫瑰杆菌和潮间带远洋杆菌(Pelagicola litorisediminis)模式菌株的DNA-DNA相关性值分别为53 ± 7.1%、22 ± 5.5%和13 ± 4.7%。这些不同的表型特征,连同系统发育和遗传独特性,表明菌株YM-20(T)与“海黄玫瑰杆菌”、泥质玫瑰杆菌、其他玫瑰杆菌属物种以及潮间带远洋杆菌是不同的。根据所提供的数据,菌株YM-20(T)被认为代表玫瑰杆菌属的一个新物种,为此提出新名称海黄玫瑰杆菌(Roseovarius gaetbuli sp. nov.)。模式菌株为YM-20(T)(= KCTC 32428(T) = CECT 8370(T))。