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鸡和鸭组蛋白H1.a的等位异构体

Allelic isoforms of the chicken and duck histone H1.a.

作者信息

Górnicka-Michalska Ewa, Kowalski Andrzej, Pałyga Jan

机构信息

Department of Biochemistry and Genetics, Institute of Biology, Jan Kochanowski University, ul. Świętokrzyska 15, 25-406, Kielce, Poland.

出版信息

Cell Mol Biol Lett. 2014 Mar;19(1):116-25. doi: 10.2478/s11658-014-0182-8. Epub 2014 Feb 6.

DOI:10.2478/s11658-014-0182-8
PMID:24549575
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6275575/
Abstract

Two isoforms of the erythrocyte histone H1.a were identified in two conservative flocks of Rhode Island Red chickens and six conservative flocks of ducks. The H1.a1 and H1.a2 isoforms formed three phenotypes (a1, a2 and a1a2) and were electrophoretically similar in the two species. The frequency of phenotype and histone H1.a allele occurrence varied within the genetic groups of birds, but the relatively rare allele a(2) was only detected in chicken and duck strains with colored feathers. Using mass spectrometry, we established that the difference between the measured masses of the duck H1.a isoforms was 156 Da. Since this value corresponds to the mass of the arginine residue alone or to the combined mass of the valine and glycine residues, we believe that the polymorphism of duck histone H1.a might have originated from sequence variation. A mass difference of 1 Da observed between chicken H1.a isoforms corresponded well to the previously detected Glu/Lys substitution (0.9414 Da) at position 117.

摘要

在两群保守的罗德岛红鸡和六群保守的鸭子中鉴定出了红细胞组蛋白H1.a的两种亚型。H1.a1和H1.a2亚型形成了三种表型(a1、a2和a1a2),并且在这两个物种中电泳结果相似。表型频率和组蛋白H1.a等位基因出现频率在鸟类的遗传群体中有所不同,但相对罕见的等位基因a(2)仅在有彩色羽毛的鸡和鸭品系中被检测到。通过质谱分析,我们确定鸭H1.a亚型的测量质量之间的差异为156 Da。由于该值仅对应精氨酸残基的质量或缬氨酸和甘氨酸残基的组合质量,我们认为鸭组蛋白H1.a的多态性可能源于序列变异。在鸡H1.a亚型之间观察到的1 Da质量差异与先前在第117位检测到的Glu/Lys取代(0.9414 Da)非常吻合。

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本文引用的文献

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Histone H1 variants are differentially expressed and incorporated into chromatin during differentiation and reprogramming to pluripotency.组蛋白 H1 变体在分化和重编程为多能性过程中差异表达并整合到染色质中。
J Biol Chem. 2011 Oct 14;286(41):35347-35357. doi: 10.1074/jbc.M111.281923. Epub 2011 Aug 18.
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Nucleosome linker DNA contacts and induces specific folding of the intrinsically disordered H1 carboxyl-terminal domain.核小体连接 DNA 接触并诱导结构无序的 H1 羧基末端结构域的特异性折叠。
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Linker histone subtypes are not generalized gene repressors.连接组蛋白亚型并非普遍的基因抑制因子。
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Multifunctionality of the linker histones: an emerging role for protein-protein interactions.连接组蛋白的多功能性:蛋白质-蛋白质相互作用的新兴作用。
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Chromatin condensing functions of the linker histone C-terminal domain are mediated by specific amino acid composition and intrinsic protein disorder.连接组蛋白C末端结构域的染色质凝聚功能由特定的氨基酸组成和内在蛋白质无序介导。
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Nucleosome repeat length and linker histone stoichiometry determine chromatin fiber structure.核小体重复长度和连接组蛋白化学计量决定染色质纤维结构。
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Fine mapping of posttranslational modifications of the linker histone H1 from Drosophila melanogaster.黑腹果蝇连接组蛋白H1翻译后修饰的精细定位
PLoS One. 2008 Feb 6;3(2):e1553. doi: 10.1371/journal.pone.0001553.
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The histone H1 family: specific members, specific functions?组蛋白H1家族:特定成员,特定功能?
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Mass spectrometric mapping of linker histone H1 variants reveals multiple acetylations, methylations, and phosphorylation as well as differences between cell culture and tissue.连接组蛋白H1变体的质谱图谱揭示了多种乙酰化、甲基化和磷酸化以及细胞培养与组织之间的差异。
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