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海洋环境中分离得到的Psychrosphaera aestuarii sp. nov. 和 Psychrosphaera haliotis sp. nov.,以及对 Psychrosphaera 属的描述修正。

Psychrosphaera aestuarii sp. nov. and Psychrosphaera haliotis sp. nov., isolated from the marine environment, and emended description of the genus Psychrosphaera.

机构信息

Department of Biological Science, College of Life Science and Natural Resources, Sunchon National University, Suncheon 540-950, Republic of Korea.

Division of Life Sciences, Korea Basic Science Institute, Daejeon 305-806, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2014 Jun;64(Pt 6):1952-1957. doi: 10.1099/ijs.0.061564-0. Epub 2014 Mar 5.

Abstract

Two motile, rod-shaped and agarolytic bacterial strains, designated PSC101(T) and KDW4(T), were isolated from seawater and gut microflora of abalone, respectively, collected from the South Sea (Republic of Korea). Cells were Gram-stain-negative, aerobic, catalase- and oxidase-positive. Strains PSC101(T) and KDW4(T) showed high 16S rRNA gene sequence similarity to each other (98.6%). Psychrosphaera saromensis SA4-48(T) was the nearest neighbour of strains PSC101(T) and KDW4(T) with 96.6% and 97.0% 16S rRNA gene sequence similarity, respectively. DNA-DNA relatedness among strains PSC101(T), KDW4(T) and Psychrosphaera saromensis KCTC 23240(T) was less than 70%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the two isolates belonged to the genus Psychrosphaera and formed a distinct phyletic line from Psychrosphaera saromensis SA4-48(T). The common major cellular fatty acids of the two novel isolates were C(16 : 0), C(17 : 1)ω8c and summed feature 3 (C(16 : 1)ω6c/C(16 : 1)ω7c). Flexirubin-type pigments were absent. The main ubiquinone was UQ-8 and the DNA G+C content of strains PSC101(T) and KDW4(T) was 49.5 and 42.5 mol%, respectively. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and an unidentified amino lipid. On the basis of the polyphasic characterization of the two strains, it is suggested that the two isolates represent two novel species of the genus Psychrosphaera, for which the names Psychrosphaera aestuarii sp. nov. (type strain, PSC101(T) = KCTC 32274(T) = JCM 19496(T)) and Psychrosphaera haliotis sp. nov. (type strain, KDW4(T) = KCTC 22500(T) = JCM 16340(T)) are proposed. An emended description of the genus Psychrosphaera is also proposed.

摘要

从南海(大韩民国)采集的鲍鱼海水和肠道微生物中,分别分离到两株运动、杆状和琼脂水解的细菌菌株,命名为 PSC101(T)和 KDW4(T)。细胞革兰氏染色阴性,需氧,过氧化氢酶和氧化酶阳性。PSC101(T)和 KDW4(T)菌株的 16S rRNA 基因序列高度相似(98.6%)。Psychrosphaera saromensis SA4-48(T)与 PSC101(T)和 KDW4(T)菌株的 16S rRNA 基因序列相似性分别为 96.6%和 97.0%,是最接近的近缘种。PSC101(T)、KDW4(T)和 Psychrosphaera saromensis KCTC 23240(T)之间的 DNA-DNA 相关性小于 70%。基于 16S rRNA 基因序列的系统发育分析表明,这两个分离株属于 Psychrosphaera 属,与 Psychrosphaera saromensis SA4-48(T)形成一个独特的系统发育分支。两个新分离株的主要细胞脂肪酸为 C(16:0)、C(17:1)ω8c 和总和特征 3(C(16:1)ω6c/C(16:1)ω7c)。不存在 flexirubin 型色素。主要的泛醌是 UQ-8,PSC101(T)和 KDW4(T)菌株的 DNA G+C 含量分别为 49.5mol%和 42.5mol%。主要的极性脂为磷脂酰乙醇胺、磷脂酰甘油和一种未鉴定的氨基脂。基于这两个菌株的多相特征,建议这两个分离株代表 Psychrosphaera 属的两个新种,分别命名为 Psychrosphaera aestuarii sp. nov.(模式菌株,PSC101(T) = KCTC 32274(T) = JCM 19496(T))和 Psychrosphaera haliotis sp. nov.(模式菌株,KDW4(T) = KCTC 22500(T) = JCM 16340(T))。还提出了 Psychrosphaera 属的修订描述。

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