从一名免疫增殖性小肠疾病患者分离出的空肠弯曲菌IPSID-1菌株的基因组序列草图
Draft Genome Sequence of Campylobacter coli Strain IPSID-1 Isolated from a Patient with Immunoproliferative Small Intestinal Disease.
作者信息
Criscuolo Alexis, de la Blanchardière Arnaud, Coeuret Solène, Passet Virginie, Saguet-Rysanek Virginie, Vergnaud Michel, Verdon Renaud, Leclercq Alexandre, Lecuit Marc, Brisse Sylvain
机构信息
Institut Pasteur, Evolutionary Microbial Genomics Unit, Paris, France.
出版信息
Genome Announc. 2014 Mar 13;2(2):e00079-14. doi: 10.1128/genomeA.00079-14.
Abstract
The genome sequence and annotation of Campylobacter coli strain IPSID-1 are reported here. This bacterial isolate is the first to be cultured from a patient with immunoproliferative small intestinal disease (IPSID). The draft genome sequence is 1.683 Mb long, comprises 64 contigs, and has 31.26% G+C content.
摘要
本文报道了空肠弯曲菌IPSID-1菌株的基因组序列和注释。该细菌分离株是首例从免疫增殖性小肠疾病（IPSID）患者中培养出来的。基因组草图序列长1.683 Mb，由64个重叠群组成，G+C含量为31.26%。
相似文献
1
Draft Genome Sequence of Campylobacter coli Strain IPSID-1 Isolated from a Patient with Immunoproliferative Small Intestinal Disease.从一名免疫增殖性小肠疾病患者分离出的空肠弯曲菌IPSID-1菌株的基因组序列草图
Genome Announc. 2014 Mar 13;2(2):e00079-14. doi: 10.1128/genomeA.00079-14.
2
Campylobacter coli cultured from the stools of a patient with immunoproliferative small intestinal disease.从一名免疫增殖性小肠疾病患者的粪便中培养出了大肠弯曲菌。
Clin Microbiol Infect. 2014 Sep;20(9):908-11. doi: 10.1111/1469-0691.12545. Epub 2014 Feb 20.
3
Immunoproliferative small intestinal disease (IPSID): a model for mature B-cell neoplasms.免疫增殖性小肠疾病（IPSID）：成熟B细胞肿瘤模型
Blood. 2005 Mar 15;105(6):2274-80. doi: 10.1182/blood-2004-07-2755. Epub 2004 Nov 12.
4
Treatment-Resistant Immunoproliferative Small Intestinal Disease (IPSID) Leading to Lymphoma.导致淋巴瘤的难治性免疫增殖性小肠疾病（IPSID）
Cureus. 2024 Jun 13;16(6):e62302. doi: 10.7759/cureus.62302. eCollection 2024 Jun.
5
The Evolution of Our Understanding of Immunoproliferative Small Intestinal Disease (IPSID) over Time.随着时间的推移，我们对免疫增生性小肠疾病（IPSID）的理解不断发展。
Curr Oncol. 2022 May 23;29(5):3759-3769. doi: 10.3390/curroncol29050301.
6
Results of laparotomy in immunoproliferative small intestinal disease.免疫增殖性小肠疾病的剖腹手术结果。
Cancer. 1988 Apr 15;61(8):1699-706. doi: 10.1002/1097-0142(19880415)61:8<1699::aid-cncr2820610831>3.0.co;2-e.
7
Heavy Chain Disease of the Small Bowel.小肠重链病
Curr Gastroenterol Rep. 2018 Jan 25;20(1):3. doi: 10.1007/s11894-018-0608-y.
8
Treating chronic diarrhea: A systematic review on Immunoproliferative Small Intestinal Disease (IPSID).治疗慢性腹泻：免疫增生性小肠疾病（IPSID）的系统评价。
PLoS One. 2021 Jul 16;16(7):e0253695. doi: 10.1371/journal.pone.0253695. eCollection 2021.
9
Primary small-intestinal lymphomas in Taiwan: immunoproliferative small-intestinal disease and nonimmunoproliferative small-intestinal disease.台湾原发性小肠淋巴瘤：免疫增殖性小肠疾病和非免疫增殖性小肠疾病。
J Clin Oncol. 1994 Jul;12(7):1375-82. doi: 10.1200/JCO.1994.12.7.1375.
10
Immunoproliferative small intestinal disease (IPSID) in Thailand.泰国的免疫增殖性小肠疾病（IPSID）。
Southeast Asian J Trop Med Public Health. 1993 Mar;24(1):11-7.
引用本文的文献
1
The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4.萘降解蛋白 NahG 在假单胞菌 LZ-4 还原六价铬中发挥关键作用。
Sci Rep. 2017 Aug 29;7(1):9670. doi: 10.1038/s41598-017-10469-w.
2
Complete Genome Sequences of the Plasmid-Bearing Campylobacter coli Strains HC2-48, CF2-75, and CO2-160 Isolated from Retail Beef Liver.从零售牛肉肝脏中分离出的携带质粒的空肠弯曲菌菌株HC2-48、CF2-75和CO2-160的全基因组序列
Genome Announc. 2016 Sep 15;4(5):e01004-16. doi: 10.1128/genomeA.01004-16.
3
SMRT sequencing of the Campylobacter coli BfR-CA-9557 genome sequence reveals unique methylation motifs.空肠弯曲杆菌BfR-CA-9557基因组序列的单分子实时测序揭示了独特的甲基化基序。
BMC Genomics. 2015 Dec 21;16:1088. doi: 10.1186/s12864-015-2317-3.
本文引用的文献
1
Campylobacter coli cultured from the stools of a patient with immunoproliferative small intestinal disease.从一名免疫增殖性小肠疾病患者的粪便中培养出了大肠弯曲菌。
Clin Microbiol Infect. 2014 Sep;20(9):908-11. doi: 10.1111/1469-0691.12545. Epub 2014 Feb 20.
2
AlienTrimmer: a tool to quickly and accurately trim off multiple short contaminant sequences from high-throughput sequencing reads.AlienTrimmer：一种快速准确地从高通量测序读取中修剪掉多个短污染序列的工具。
Genomics. 2013 Nov-Dec;102(5-6):500-6. doi: 10.1016/j.ygeno.2013.07.011. Epub 2013 Aug 1.
3
Immunoproliferative small intestinal disease associated with Campylobacter jejuni.与空肠弯曲菌相关的免疫增殖性小肠疾病
Dig Liver Dis. 2012 Sep;44(9):799-800. doi: 10.1016/j.dld.2012.03.020. Epub 2012 Apr 30.
4
Campylobacter spp. as a Foodborne Pathogen: A Review.弯曲杆菌属作为食源性病原体：综述。
Front Microbiol. 2011 Sep 27;2:200. doi: 10.3389/fmicb.2011.00200. eCollection 2011.
5
The role of Campylobacter jejuni cytolethal distending toxin in gastroenteritis: toxin detection, antibody production, and clinical outcome.空肠弯曲菌细胞肿胀毒素在胃肠炎中的作用：毒素检测、抗体产生和临床结果。
APMIS. 2011 Sep;119(9):626-634. doi: 10.1111/j.1600-0463.2011.02781.x. Epub 2011 Jun 21.
6
The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
7
Infection-associated lymphomas derived from marginal zone B cells: a model of antigen-driven lymphoproliferation.源自边缘区B细胞的感染相关淋巴瘤：抗原驱动淋巴细胞增殖模型
Blood. 2006 Apr 15;107(8):3034-44. doi: 10.1182/blood-2005-09-3679. Epub 2006 Jan 5.
8
Immunoproliferative small intestinal disease associated with Campylobacter jejuni.空肠弯曲菌相关的免疫增殖性小肠疾病
N Engl J Med. 2004 Jan 15;350(3):239-48. doi: 10.1056/NEJMoa031887.
9
CdtA, CdtB, and CdtC form a tripartite complex that is required for cytolethal distending toxin activity.CdtA、CdtB和CdtC形成一个三联体复合物，这是细胞致死性扩张毒素活性所必需的。
Infect Immun. 2001 Jul;69(7):4358-65. doi: 10.1128/IAI.69.7.4358-4365.2001.
10
Multilocus sequence typing system for Campylobacter jejuni.空肠弯曲菌多位点序列分型系统
J Clin Microbiol. 2001 Jan;39(1):14-23. doi: 10.1128/JCM.39.1.14-23.2001.
Zotero 插件