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日本长鳍鳎(鲽形目:鳎科)的完整线粒体基因组

The complete mitochondrial genome of the wavyband sole Pseudaesopia japonica (Pleuronectiformes: Soleidae).

作者信息

Chen Xiao, Ai Weiming, Xiang Dan, Shi Xiaofang, Pan Lianghao

机构信息

a Department of Marine Science , Wenzhou Medical University , Wenzhou , PR China and.

b Guangxi Key Lab for Mangrove Conservation and Utilization , Guangxi Mangrove Research Center, Guangxi Academy of Sciences , Beihai , PR China.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):420-1. doi: 10.3109/19401736.2014.898286. Epub 2014 Mar 24.

DOI:10.3109/19401736.2014.898286
PMID:24660923
Abstract

The wavyband sole Pseudaesopia japonica is the only known member of the genus Pseudaesopia. In this study, we firstly determined the complete mitochondrial genome of P. japonica. It is 16,789 bp in length and contains two rRNA genes, 22 tRNA genes, 13 protein-coding genes and one putative control region with the typical gene order and transcriptional direction in vertebrates. The overall base composition of mitogenome in P. japonica is 28.4% A, 30.3% C, 15.6% G and 25.7% T. Two start codons (ATG and GTG) and four stop codons (AGA, AGG, TAG and TAA) were found in 13 protein-coding genes. The 22 tRNAs range from 67 bp (tRNA-Cys and tRNA-Tyr) to 75 bp (tRNA-Lys) in length. The control region is 1120 bp in length, representing a higher proportion of A + T (65.3%) while lower of G (12.0%).

摘要

波纹带鳎(Pseudaesopia japonica)是鳎属(Pseudaesopia)中唯一已知的成员。在本研究中,我们首次测定了波纹带鳎的完整线粒体基因组。其长度为16,789 bp,包含两个rRNA基因、22个tRNA基因、13个蛋白质编码基因和一个假定的控制区,具有脊椎动物典型的基因排列顺序和转录方向。波纹带鳎线粒体基因组的总体碱基组成为28.4%A、30.3%C、15.6%G和25.7%T。在13个蛋白质编码基因中发现了两个起始密码子(ATG和GTG)和四个终止密码子(AGA、AGG、TAG和TAA)。22个tRNA的长度从67 bp(tRNA-Cys和tRNA-Tyr)到75 bp(tRNA-Lys)不等。控制区长1120 bp,A+T比例较高(65.3%),而G比例较低(12.0%)。

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