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鉴定布鲁氏菌 2308 中的新型 sRNAs。

Identification of novel sRNAs in Brucella abortus 2308.

机构信息

Key Laboratory of Animal Epidemiology and Zoonosis of Ministry of Agriculture, College of Veterinary Medicine, China Agricultural University, Beijing, China.

出版信息

FEMS Microbiol Lett. 2014 May;354(2):119-25. doi: 10.1111/1574-6968.12433. Epub 2014 Apr 16.

Abstract

Involved in diverse biological processes, bacterial sRNAs are novel regulators of gene expression involved in a wide array of biological processes. To identify sRNAs in Brucella abortus, we performed a genome-wide computational prediction with integrated SIPHT and NAPP results. In total, 129 sRNA candidates were identified, of which 112 were novel sRNA. Twenty novel sRNA candidates were tested by RT-PCR and seven could be verified. The putative targets of these sRNAs were also predicted and verified. This study provides a significant resource for the future study of sRNAs, as well as how sRNAs influence B. abortus physiology and pathogenesis.

摘要

参与多种生物过程,细菌 sRNAs 是涉及广泛生物过程的基因表达新的调控因子。为了鉴定布鲁氏菌中的 sRNAs,我们进行了全基因组的计算预测,结合 SIPHT 和 NAPP 的结果。总共鉴定了 129 个 sRNA 候选者,其中 112 个是新的 sRNA。通过 RT-PCR 测试了 20 个新的 sRNA 候选者,其中 7 个可以得到验证。这些 sRNAs 的假定靶标也被预测和验证。本研究为 sRNAs 的未来研究以及 sRNAs 如何影响 B. abortus 的生理和发病机制提供了重要资源。

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