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用临床蛋白质组学解决创伤性脑损伤的需求。

Addressing the needs of traumatic brain injury with clinical proteomics.

机构信息

Department of Chemistry and Biochemistry, University of California-Los Angeles, Los Angeles, CA 90095, USA.

出版信息

Clin Proteomics. 2014 Mar 28;11(1):11. doi: 10.1186/1559-0275-11-11.

Abstract

BACKGROUND

Neurotrauma or injuries to the central nervous system (CNS) are a serious public health problem worldwide. Approximately 75% of all traumatic brain injuries (TBIs) are concussions or other mild TBI (mTBI) forms. Evaluation of concussion injury today is limited to an assessment of behavioral symptoms, often with delay and subject to motivation. Hence, there is an urgent need for an accurate chemical measure in biofluids to serve as a diagnostic tool for invisible brain wounds, to monitor severe patient trajectories, and to predict survival chances. Although a number of neurotrauma marker candidates have been reported, the broad spectrum of TBI limits the significance of small cohort studies. Specificity and sensitivity issues compound the development of a conclusive diagnostic assay, especially for concussion patients. Thus, the neurotrauma field currently has no diagnostic biofluid test in clinical use.

CONTENT

We discuss the challenges of discovering new and validating identified neurotrauma marker candidates using proteomics-based strategies, including targeting, selection strategies and the application of mass spectrometry (MS) technologies and their potential impact to the neurotrauma field.

SUMMARY

Many studies use TBI marker candidates based on literature reports, yet progress in genomics and proteomics have started to provide neurotrauma protein profiles. Choosing meaningful marker candidates from such 'long lists' is still pending, as only few can be taken through the process of preclinical verification and large scale translational validation. Quantitative mass spectrometry targeting specific molecules rather than random sampling of the whole proteome, e.g., multiple reaction monitoring (MRM), offers an efficient and effective means to multiplex the measurement of several candidates in patient samples, thereby omitting the need for antibodies prior to clinical assay design. Sample preparation challenges specific to TBI are addressed. A tailored selection strategy combined with a multiplex screening approach is helping to arrive at diagnostically suitable candidates for clinical assay development. A surrogate marker test will be instrumental for critical decisions of TBI patient care and protection of concussion victims from repeated exposures that could result in lasting neurological deficits.

摘要

背景

神经创伤或中枢神经系统(CNS)损伤是全球范围内一个严重的公共卫生问题。大约 75%的所有创伤性脑损伤(TBI)都是脑震荡或其他轻度 TBI(mTBI)形式。目前,对脑震荡损伤的评估仅限于对行为症状的评估,通常存在延迟且受到动机的影响。因此,迫切需要在生物流体中有一种准确的化学测量方法,作为一种诊断工具,用于检测无形的脑损伤,监测严重患者的轨迹,并预测生存机会。尽管已经报道了许多神经创伤标志物候选物,但 TBI 的广泛范围限制了小队列研究的意义。特异性和敏感性问题加剧了结论性诊断测定的发展,特别是对于脑震荡患者。因此,神经创伤领域目前没有在临床中使用的诊断性生物流体测试。

内容

我们讨论了使用基于蛋白质组学的策略发现新的和验证已确定的神经创伤标志物候选物所面临的挑战,包括靶向、选择策略以及质谱(MS)技术的应用及其对神经创伤领域的潜在影响。

总结

许多研究使用基于文献报道的 TBI 标志物候选物,但基因组学和蛋白质组学的进展已开始提供神经创伤蛋白谱。从这些“长列表”中选择有意义的标志物候选物仍在进行中,因为只有少数候选物可以通过临床前验证和大规模转化验证的过程。与随机采样整个蛋白质组相比,针对特定分子的定量质谱(如多重反应监测(MRM))提供了一种高效、有效的方法,可以在患者样本中同时测量多个候选物,从而在临床测定设计之前无需使用抗体。TBI 特定的样品准备挑战得到解决。结合多重筛选方法的定制选择策略有助于找到适合临床测定开发的诊断候选物。替代标志物测试对于 TBI 患者护理的关键决策以及防止脑震荡受害者受到反复暴露的影响至关重要,反复暴露可能导致持久的神经功能缺损。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58dc/3976360/8f809fdd5411/1559-0275-11-11-1.jpg

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