State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province, PR China.
Parasit Vectors. 2014 Mar 31;7:150. doi: 10.1186/1756-3305-7-150.
Fascioliasis is an important and neglected disease of humans and other mammals, caused by trematodes of the genus Fasciola. Fasciola hepatica and F. gigantica are valid species that infect humans and animals, but the specific status of Fasciola sp. ('intermediate form') is unclear.
Single specimens inferred to represent Fasciola sp. ('intermediate form'; Heilongjiang) and F. gigantica (Guangxi) from China were genetically identified and characterized using PCR-based sequencing of the first and second internal transcribed spacer regions of nuclear ribosomal DNA. The complete mitochondrial (mt) genomes of these representative specimens were then sequenced. The relationships of these specimens with selected members of the Trematoda were assessed by phylogenetic analysis of concatenated amino acid sequence datasets by Bayesian inference (BI).
The complete mt genomes of representatives of Fasciola sp. and F. gigantica were 14,453 bp and 14,478 bp in size, respectively. Both mt genomes contain 12 protein-coding genes, 22 transfer RNA genes and two ribosomal RNA genes, but lack an atp8 gene. All protein-coding genes are transcribed in the same direction, and the gene order in both mt genomes is the same as that published for F. hepatica. Phylogenetic analysis of the concatenated amino acid sequence data for all 12 protein-coding genes showed that the specimen of Fasciola sp. was more closely related to F. gigantica than to F. hepatica.
The mt genomes characterized here provide a rich source of markers, which can be used in combination with nuclear markers and imaging techniques, for future comparative studies of the biology of Fasciola sp. from China and other countries.
片形吸虫病是一种重要且被忽视的人类和其他哺乳动物疾病,由片形科吸虫引起。肝片形吸虫和巨片形吸虫是感染人类和动物的有效物种,但中间型片形吸虫(Fasciola sp.)的具体地位尚不清楚。
从中国采集的单个疑似中间型片形吸虫(黑龙江)和巨片形吸虫(广西)标本,通过聚合酶链反应(PCR)对核核糖体 DNA 的第一和第二内部转录间隔区进行基因鉴定和特征分析。然后对这些代表性标本的完整线粒体(mt)基因组进行测序。通过贝叶斯推断(BI)对串联氨基酸序列数据集进行系统发育分析,评估这些标本与所选吸虫类群成员的关系。
中间型片形吸虫和巨片形吸虫代表标本的完整 mt 基因组大小分别为 14453bp 和 14478bp。两个 mt 基因组均包含 12 个蛋白编码基因、22 个转移 RNA 基因和两个核糖体 RNA 基因,但缺少 atp8 基因。所有蛋白编码基因均按同一方向转录,并且两个 mt 基因组的基因排列与已发表的肝片形吸虫相同。对所有 12 个蛋白编码基因串联氨基酸序列数据进行的系统发育分析表明,中间型片形吸虫标本与巨片形吸虫的亲缘关系比与肝片形吸虫更近。
这里描述的 mt 基因组为进一步研究中国和其他国家的中间型片形吸虫生物学提供了丰富的标记物来源,这些标记物可以与核标记物和成像技术结合使用。