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质粒ColE1的Rom转录本。

Rom transcript of plasmid ColE1.

作者信息

Brenner M, Tomizawa J

机构信息

Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, Bethesda, MD 20892.

出版信息

Nucleic Acids Res. 1989 Jun 12;17(11):4309-26. doi: 10.1093/nar/17.11.4309.

DOI:10.1093/nar/17.11.4309
PMID:2472606
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC317936/
Abstract

The ColE1 Rom protein contributes to copy number control by affecting the rate of formation of a complex between RNA II, the precursor of the primer for DNA replication, and RNA I, a small RNA complementary to the 5' end of RNA II. Interaction of RNA I with RNA II can affect plasmid copy number by preventing primer formation. Although the RNA I and RNA II transcripts have been well characterized, the rom mRNA has not previously been detected. We have now identified the rom mRNA, and determined its start site both in vitro and in vivo. We also have found that the rom mRNA terminates at any of several sites, and that its synthesis is not autoregulated by the Rom protein. By using an internal standard RNA to estimate the efficiency of detection of the rom mRNA, its level was determined to be about 1 molecule per cell.

摘要

ColE1 Rom蛋白通过影响RNA II(DNA复制引物的前体)与RNA I(与RNA II 5'端互补的小RNA)之间复合物的形成速率来控制拷贝数。RNA I与RNA II的相互作用可通过阻止引物形成来影响质粒拷贝数。尽管RNA I和RNA II转录本已得到充分表征,但此前尚未检测到rom mRNA。我们现已鉴定出rom mRNA,并在体外和体内确定了其起始位点。我们还发现rom mRNA在几个位点中的任何一个处终止,并且其合成不受Rom蛋白的自动调节。通过使用内标RNA来估计rom mRNA的检测效率,确定其水平约为每个细胞1个分子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/a15eaf6bc837/nar00128-0311-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/533f25c8d3c7/nar00128-0305-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/b9292fb71d12/nar00128-0306-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/8e75d92c1d65/nar00128-0309-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/a15eaf6bc837/nar00128-0311-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/533f25c8d3c7/nar00128-0305-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/b9292fb71d12/nar00128-0306-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/8e75d92c1d65/nar00128-0309-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2911/317936/a15eaf6bc837/nar00128-0311-a.jpg

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1
Rom transcript of plasmid ColE1.质粒ColE1的Rom转录本。
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引用本文的文献

1
Hypothesis: hypersensitive plasmid copy number control for ColE1.假设:ColE1的超敏质粒拷贝数控制
Biophys J. 1996 Jan;70(1):135-45. doi: 10.1016/S0006-3495(96)79555-3.
2
Quantitation of ColE1-encoded replication elements.ColE1编码的复制元件的定量分析。
Proc Natl Acad Sci U S A. 1991 Jan 15;88(2):405-9. doi: 10.1073/pnas.88.2.405.

本文引用的文献

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Segregation of New Lysogenic Types during Growth of a Doubly Lysogenic Strain Derived from Escherichia Coli K12.源于大肠杆菌K12的双重溶源菌株生长过程中新溶源类型的分离
Genetics. 1954 Jul;39(4):440-52. doi: 10.1093/genetics/39.4.440.
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Trans-complementable copy-number mutants of plasmid ColE1.质粒ColE1的反式可互补拷贝数突变体
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Compilation and analysis of Escherichia coli promoter DNA sequences.大肠杆菌启动子DNA序列的汇编与分析
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Regulatory regions of ColE1 that are involved in determination of plasmid copy number.参与确定质粒拷贝数的大肠杆菌ColE1调控区域。
Proc Natl Acad Sci U S A. 1983 Jun;80(11):3232-6. doi: 10.1073/pnas.80.11.3232.
5
Control of ColE1 plasmid replication: enhancement of binding of RNA I to the primer transcript by the Rom protein.ColE1质粒复制的调控:Rom蛋白增强RNA I与引物转录本的结合
Cell. 1984 Oct;38(3):871-8. doi: 10.1016/0092-8674(84)90282-4.
6
Control of initiation of pMB1 replication: purified Rop protein and RNA I affect primer formation in vitro.pMB1复制起始的控制:纯化的Rop蛋白和RNA I在体外影响引物形成。
Cell. 1984 Jul;37(3):1009-14. doi: 10.1016/0092-8674(84)90435-5.
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Effects of point mutations on formation and structure of the RNA primer for ColE1 DNA replication.点突变对ColE1 DNA复制的RNA引物形成及结构的影响。
Cell. 1984 Feb;36(2):513-22. doi: 10.1016/0092-8674(84)90244-7.
8
Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H.核糖核酸酶H形成用于启动ColE1 DNA复制的RNA引物。
Proc Natl Acad Sci U S A. 1980 May;77(5):2450-4. doi: 10.1073/pnas.77.5.2450.
9
Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.从含有噬菌体SP6启动子的质粒中高效体外合成生物活性RNA和RNA杂交探针。
Nucleic Acids Res. 1984 Sep 25;12(18):7035-56. doi: 10.1093/nar/12.18.7035.
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Integration-negative mutants of bacteriophage lambda.噬菌体λ的整合阴性突变体
J Mol Biol. 1968 Feb 14;31(3):487-505. doi: 10.1016/0022-2836(68)90423-3.