• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

部分无序抗σ因子与其伴侣、TonB 依赖性转运体 HasR 的信号结构域的相互作用。

Interaction of a partially disordered antisigma factor with its partner, the signaling domain of the TonB-dependent transporter HasR.

机构信息

Institut Pasteur, Unité de RMN des Biomolécules, Département de Biologie Structurale et Chimie, Paris, France; CNRS, UMR 3528, Paris, France; Université Pierre et Marie Curie, Cellule Pasteur UPMC, Paris, France.

Institut Pasteur, Unité de RMN des Biomolécules, Département de Biologie Structurale et Chimie, Paris, France; CNRS, UMR 3528, Paris, France.

出版信息

PLoS One. 2014 Apr 11;9(4):e89502. doi: 10.1371/journal.pone.0089502. eCollection 2014.

DOI:10.1371/journal.pone.0089502
PMID:24727671
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3984077/
Abstract

Bacteria use diverse signaling pathways to control gene expression in response to external stimuli. In Gram-negative bacteria, the binding of a nutrient is sensed by an outer membrane transporter. This signal is then transmitted to an antisigma factor and subsequently to the cytoplasm where an ECF sigma factor induces expression of genes related to the acquisition of this nutrient. The molecular interactions involved in this transmembrane signaling are poorly understood and structural data on this family of antisigma factor are rare. Here, we present the first structural study of the periplasmic domain of an antisigma factor and its interaction with the transporter. The study concerns the signaling in the heme acquisition system (Has) of Serratia marcescens. Our data support unprecedented partially disordered periplasmic domain of an anti-sigma factor HasS in contact with a membrane-mimicking environment. We solved the 3D structure of the signaling domain of HasR transporter and identified the residues at the HasS-HasR interface. Their conservation in several bacteria suggests wider significance of the proposed model for the understanding of bacterial transmembrane signaling.

摘要

细菌利用多种信号通路来响应外部刺激控制基因表达。在革兰氏阴性菌中,营养物质的结合由外膜转运蛋白感知。然后,该信号被传递给反西格玛因子,然后传递到细胞质,其中 ECF 西格玛因子诱导与获取该营养物质相关的基因表达。这个跨膜信号转导中涉及的分子相互作用还不太清楚,并且这个反西格玛因子家族的结构数据也很少。在这里,我们首次研究了反西格玛因子的周质域及其与转运蛋白的相互作用。该研究涉及粘质沙雷氏菌血红素获取系统 (Has) 的信号转导。我们的数据支持反西格玛因子 HasS 的前所未有的部分无序周质域与模拟膜环境接触。我们解决了 HasR 转运蛋白信号域的 3D 结构,并确定了 HasS-HasR 界面上的残基。它们在几种细菌中的保守性表明,所提出的模型对于理解细菌跨膜信号转导具有更广泛的意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/cfb5f7ae67f2/pone.0089502.g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/b9ee3b583027/pone.0089502.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/87936444d2e5/pone.0089502.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/15741f601bdb/pone.0089502.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/c0f07d4a2b2b/pone.0089502.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/a99d335c9913/pone.0089502.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/e135b5e3bd38/pone.0089502.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/149ce86102b3/pone.0089502.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/6a46a2dad6d3/pone.0089502.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/cfb5f7ae67f2/pone.0089502.g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/b9ee3b583027/pone.0089502.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/87936444d2e5/pone.0089502.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/15741f601bdb/pone.0089502.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/c0f07d4a2b2b/pone.0089502.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/a99d335c9913/pone.0089502.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/e135b5e3bd38/pone.0089502.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/149ce86102b3/pone.0089502.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/6a46a2dad6d3/pone.0089502.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7437/3984077/cfb5f7ae67f2/pone.0089502.g009.jpg

相似文献

1
Interaction of a partially disordered antisigma factor with its partner, the signaling domain of the TonB-dependent transporter HasR.部分无序抗σ因子与其伴侣、TonB 依赖性转运体 HasR 的信号结构域的相互作用。
PLoS One. 2014 Apr 11;9(4):e89502. doi: 10.1371/journal.pone.0089502. eCollection 2014.
2
Haemophore-mediated signalling in Serratia marcescens: a new mode of regulation for an extra cytoplasmic function (ECF) sigma factor involved in haem acquisition.粘质沙雷氏菌中血色素载体介导的信号传导:参与血红素摄取的胞外功能(ECF)σ因子的一种新调控模式。
Mol Microbiol. 2004 Aug;53(4):1267-77. doi: 10.1111/j.1365-2958.2004.04207.x.
3
Modulation by substrates of the interaction between the HasR outer membrane receptor and its specific TonB-like protein, HasB.底物对HasR外膜受体与其特异性类TonB蛋白HasB之间相互作用的调节作用
J Mol Biol. 2008 May 9;378(4):840-51. doi: 10.1016/j.jmb.2008.03.044. Epub 2008 Mar 28.
4
(1)H, (13)C and (15)N resonance assignments of the periplasmic signalling domain of HasR, a TonB-dependent outer membrane heme transporter.HasR(一种与TonB相关的外膜血红素转运蛋白)周质信号结构域的氢(¹H)、碳(¹³C)和氮(¹⁵N)共振归属
Biomol NMR Assign. 2013 Apr;7(1):43-6. doi: 10.1007/s12104-012-9377-y. Epub 2012 Mar 14.
5
Structural basis of the signalling through a bacterial membrane receptor HasR deciphered by an integrative approach.通过综合方法解析细菌膜受体HasR信号传导的结构基础
Biochem J. 2016 Jul 15;473(14):2239-48. doi: 10.1042/BCJ20160131. Epub 2016 May 13.
6
Activities of the Serratia marcescens heme receptor HasR and isolated plug and beta-barrel domains: the beta-barrel forms a heme-specific channel.粘质沙雷氏菌血红素受体HasR及分离出的塞子结构域和β桶结构域的活性:β桶形成一个血红素特异性通道。
J Bacteriol. 2005 Jul;187(13):4637-45. doi: 10.1128/JB.187.13.4637-4645.2005.
7
Haemophore-mediated signal transduction across the bacterial cell envelope in Serratia marcescens: the inducer and the transported substrate are different molecules.粘质沙雷氏菌中血色素介导的信号转导穿过细菌细胞壁:诱导物和转运底物是不同的分子。
Mol Microbiol. 2003 Jun;48(6):1467-80. doi: 10.1046/j.1365-2958.2003.03516.x.
8
The structure of HasB reveals a new class of TonB protein fold.HasB 的结构揭示了 TonB 蛋白折叠的一个新类别。
PLoS One. 2013;8(3):e58964. doi: 10.1371/journal.pone.0058964. Epub 2013 Mar 19.
9
Characterization of HasB, a Serratia marcescens TonB-like protein specifically involved in the haemophore-dependent haem acquisition system.粘质沙雷氏菌中HasB的特性研究,HasB是一种与依赖血色素载体的血红素获取系统特异性相关的类TonB蛋白。
Mol Microbiol. 2001 Nov;42(4):995-1005. doi: 10.1046/j.1365-2958.2001.02628.x.
10
Interactions of HasA, a bacterial haemophore, with haemoglobin and with its outer membrane receptor HasR.细菌血红蛋白载体HasA与血红蛋白及其外膜受体HasR的相互作用。
Mol Microbiol. 1999 Aug;33(3):546-55. doi: 10.1046/j.1365-2958.1999.01499.x.

引用本文的文献

1
Structural Analysis of Proteins from Bacterial Secretion Systems and Their Assemblies by NMR Spectroscopy.利用 NMR 光谱技术对细菌分泌系统及其组装体中的蛋白质进行结构分析。
Methods Mol Biol. 2024;2715:503-517. doi: 10.1007/978-1-0716-3445-5_30.
2
Transcription regulation of iron carrier transport genes by ECF sigma factors through signaling from the cell surface into the cytoplasm.ECFσ因子通过信号从细胞表面传递到细胞质中对铁载体运输基因的转录调控。
FEMS Microbiol Rev. 2022 Jul 1;46(4). doi: 10.1093/femsre/fuac010.
3
Extracellular haem utilization by the opportunistic pathogen Pseudomonas aeruginosa and its role in virulence and pathogenesis.

本文引用的文献

1
The structure of HasB reveals a new class of TonB protein fold.HasB 的结构揭示了 TonB 蛋白折叠的一个新类别。
PLoS One. 2013;8(3):e58964. doi: 10.1371/journal.pone.0058964. Epub 2013 Mar 19.
2
A unified conformational selection and induced fit approach to protein-peptide docking.一种统一的构象选择和诱导契合方法用于蛋白质-肽对接。
PLoS One. 2013;8(3):e58769. doi: 10.1371/journal.pone.0058769. Epub 2013 Mar 13.
3
FlgM proteins from different bacteria exhibit different structural characteristics.来自不同细菌的FlgM蛋白表现出不同的结构特征。
机会致病菌铜绿假单胞菌对细胞外血红素的利用及其在毒力和发病机制中的作用。
Adv Microb Physiol. 2021;79:89-132. doi: 10.1016/bs.ampbs.2021.07.004. Epub 2021 Aug 13.
4
Insights into SusCD-mediated glycan import by a prominent gut symbiont.洞悉重要肠道共生菌通过 SusCD 进行聚糖摄取的机制
Nat Commun. 2021 Jan 4;12(1):44. doi: 10.1038/s41467-020-20285-y.
5
Structural basis of cell-surface signaling by a conserved sigma regulator in Gram-negative bacteria.革兰氏阴性菌中保守 sigma 调节因子的细胞表面信号转导的结构基础。
J Biol Chem. 2020 Apr 24;295(17):5795-5806. doi: 10.1074/jbc.RA119.010697. Epub 2020 Feb 26.
6
Structural basis of the signalling through a bacterial membrane receptor HasR deciphered by an integrative approach.通过综合方法解析细菌膜受体HasR信号传导的结构基础
Biochem J. 2016 Jul 15;473(14):2239-48. doi: 10.1042/BCJ20160131. Epub 2016 May 13.
7
Mechanistic Implications of the Unique Structural Features and Dimerization of the Cytoplasmic Domain of the Pseudomonas Sigma Regulator, PupR.铜绿假单胞菌西格玛调节因子PupR细胞质结构域独特结构特征和二聚化的机制意义
Biochemistry. 2015 Sep 29;54(38):5867-77. doi: 10.1021/acs.biochem.5b00826. Epub 2015 Sep 14.
8
Self-cleavage of the Pseudomonas aeruginosa Cell-surface Signaling Anti-sigma Factor FoxR Occurs through an N-O Acyl Rearrangement.铜绿假单胞菌细胞表面信号抗σ因子FoxR的自我切割通过N-O酰基重排发生。
J Biol Chem. 2015 May 8;290(19):12237-46. doi: 10.1074/jbc.M115.643098. Epub 2015 Mar 25.
Biochim Biophys Acta. 2013 Apr;1834(4):808-16. doi: 10.1016/j.bbapap.2013.01.010. Epub 2013 Jan 22.
4
Advances in integrative modeling of biomolecular complexes.生物分子复合物综合建模的进展。
Methods. 2013 Mar;59(3):372-81. doi: 10.1016/j.ymeth.2012.12.004. Epub 2012 Dec 23.
5
Ligand-induced structural changes in the Escherichia coli ferric citrate transporter reveal modes for regulating protein-protein interactions.配体诱导的大肠杆菌柠檬酸铁转运蛋白的结构变化揭示了调节蛋白-蛋白相互作用的方式。
J Mol Biol. 2012 Nov 9;423(5):818-30. doi: 10.1016/j.jmb.2012.09.003. Epub 2012 Sep 11.
6
Haemophore functions revisited.重温血蓝蛋白的功能。
Mol Microbiol. 2012 Aug;85(4):618-31. doi: 10.1111/j.1365-2958.2012.08136.x. Epub 2012 Jul 5.
7
Modeling detergent organization around aquaporin-0 using small-angle X-ray scattering.利用小角度 X 射线散射对水通道蛋白-0 周围的去污剂组织进行建模。
J Am Chem Soc. 2012 Jun 20;134(24):10080-8. doi: 10.1021/ja301667n. Epub 2012 Jun 7.
8
(1)H, (13)C and (15)N resonance assignments of the periplasmic signalling domain of HasR, a TonB-dependent outer membrane heme transporter.HasR(一种与TonB相关的外膜血红素转运蛋白)周质信号结构域的氢(¹H)、碳(¹³C)和氮(¹⁵N)共振归属
Biomol NMR Assign. 2013 Apr;7(1):43-6. doi: 10.1007/s12104-012-9377-y. Epub 2012 Mar 14.
9
Regulation of alternative sigma factor use.σ因子的调控。
Annu Rev Microbiol. 2011;65:37-55. doi: 10.1146/annurev.micro.112408.134219.
10
Sedimentation velocity to characterize surfactants and solubilized membrane proteins.利用沉降速度特性来表征表面活性剂和增溶的膜蛋白。
Methods. 2011 May;54(1):56-66. doi: 10.1016/j.ymeth.2010.11.003. Epub 2010 Nov 26.