Wojtowicz Halina, Prochnicka-Chalufour Ada, de Amorim Gisele Cardoso, Roudenko Olga, Simenel Catherine, Malki Idir, Pehau-Arnaudet Gérard, Gubellini Francesca, Koutsioubas Alexandros, Pérez Javier, Delepelaire Philippe, Delepierre Muriel, Fronzes Rémi, Izadi-Pruneyre Nadia
Département de Biologie Structurale et Chimie, Unité de Résonance Magnétique Nucléaire des Biomolécules, Institut Pasteur, Paris, France CNRS, UMR 3528, Paris, France.
Beamline SWING, Synchrotron SOLEIL, Saint-Aubin, France.
Biochem J. 2016 Jul 15;473(14):2239-48. doi: 10.1042/BCJ20160131. Epub 2016 May 13.
Bacteria use diverse signalling pathways to adapt gene expression to external stimuli. In Gram-negative bacteria, the binding of scarce nutrients to membrane transporters triggers a signalling process that up-regulates the expression of genes of various functions, from uptake of nutrient to production of virulence factors. Although proteins involved in this process have been identified, signal transduction through this family of transporters is not well understood. In the present study, using an integrative approach (EM, SAXS, X-ray crystallography and NMR), we have studied the structure of the haem transporter HasR captured in two stages of the signalling process, i.e. before and after the arrival of signalling activators (haem and its carrier protein). We show for the first time that the HasR domain responsible for signal transfer: (i) is highly flexible in two stages of signalling; (ii) extends into the periplasm at approximately 70-90 Å (1 Å=0.1 nm) from the HasR β-barrel; and (iii) exhibits local conformational changes in response to the arrival of signalling activators. These features would favour the signal transfer from HasR to its cytoplasmic membrane partners.
细菌利用多种信号通路来使基因表达适应外部刺激。在革兰氏阴性菌中,稀缺营养物质与膜转运蛋白的结合会触发一个信号传导过程,该过程会上调从营养物质摄取到毒力因子产生等各种功能基因的表达。尽管参与此过程的蛋白质已被鉴定出来,但通过这一家族转运蛋白的信号转导仍未被充分理解。在本研究中,我们采用了一种综合方法(电子显微镜、小角X射线散射、X射线晶体学和核磁共振),研究了在信号传导过程的两个阶段(即信号激活剂(血红素及其载体蛋白)到达之前和之后)捕获的血红素转运蛋白HasR的结构。我们首次表明,负责信号传递的HasR结构域:(i)在信号传导的两个阶段具有高度灵活性;(ii)从HasRβ桶向周质延伸约70 - 90埃(1埃 = 0.1纳米);(iii)响应信号激活剂的到来表现出局部构象变化。这些特征将有利于信号从HasR传递到其细胞质膜伙伴。