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本文引用的文献

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Bacterial genome sequencing in the clinic: bioinformatic challenges and solutions.临床细菌基因组测序:生物信息学面临的挑战与解决方案。
Nat Rev Genet. 2014 Jan;15(1):49-55. doi: 10.1038/nrg3624. Epub 2013 Nov 26.
2
Gut microbiota from twins discordant for obesity modulate metabolism in mice.肥胖症双胞胎的肠道微生物群可调节小鼠的代谢。
Science. 2013 Sep 6;341(6150):1241214. doi: 10.1126/science.1241214.
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Medical research. The promise of poop.医学研究。粪便的前景。
Science. 2013 Aug 30;341(6149):954-7. doi: 10.1126/science.341.6149.954.
4
Faecalibacterium prausnitzii supernatant improves intestinal barrier function in mice DSS colitis.普拉梭菌上清液可改善小鼠葡聚糖硫酸钠诱导的结肠炎的肠道屏障功能。
Scand J Gastroenterol. 2013 Oct;48(10):1136-44. doi: 10.3109/00365521.2013.828773. Epub 2013 Aug 26.
5
Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment.具核梭杆菌增强肠道肿瘤发生,并调节肿瘤免疫微环境。
Cell Host Microbe. 2013 Aug 14;14(2):207-15. doi: 10.1016/j.chom.2013.07.007.
6
Alteration of intestinal dysbiosis by fecal microbiota transplantation does not induce remission in patients with chronic active ulcerative colitis.粪菌移植改变肠道菌群失调并不能诱导慢性活动性溃疡性结肠炎患者缓解。
Inflamm Bowel Dis. 2013 Sep;19(10):2155-65. doi: 10.1097/MIB.0b013e31829ea325.
7
Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota.通过从人类微生物群中合理选择的共生梭菌混合物诱导 Treg。
Nature. 2013 Aug 8;500(7461):232-6. doi: 10.1038/nature12331. Epub 2013 Jul 10.
8
Survival in hostile territory: the microbiota of the stomach.在恶劣环境中生存:胃中的微生物组。
FEMS Microbiol Rev. 2013 Sep;37(5):736-61. doi: 10.1111/1574-6976.12027. Epub 2013 Jul 22.
9
A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of Shiga-toxigenic Escherichia coli O104:H4.一种基于序列的无需培养的宏基因组学方法用于研究志贺毒素产生型大肠杆菌 O104:H4 的暴发。
JAMA. 2013 Apr 10;309(14):1502-10. doi: 10.1001/jama.2013.3231.
10
Alterations in the colonic microbiota in response to osmotic diarrhea.肠道微生物群落对渗透性腹泻的反应变化。
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临床应用肠道宏基因组学:医生的愿望清单

A physicians' wish list for the clinical application of intestinal metagenomics.

机构信息

Core Facility Molecular Biology, Center for Medical Research, Medical University of Graz, Graz, Austria.

Department of Gastroenterology and Hepatology, Medical University of Graz, Graz, Austria.

出版信息

PLoS Med. 2014 Apr 15;11(4):e1001627. doi: 10.1371/journal.pmed.1001627. eCollection 2014 Apr.

DOI:10.1371/journal.pmed.1001627
PMID:24736271
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3987993/
Abstract

Christoph Steininger and colleagues explore how multiple infectious, autoimmune, metabolic, and neoplastic diseases have been associated with changes in the intestinal microbiome, although a cause-effect relationship is often difficult to establish. Integration of metagenomics into clinical medicine is a challenge, and the authors highlight clinical approaches that are of high priority for the useful medical application of metagenomics. Please see later in the article for the Editors' Summary.

摘要

克里斯托夫·施泰宁格及其同事探讨了多种感染性、自身免疫性、代谢性和肿瘤性疾病如何与肠道微生物组的变化相关联,尽管通常很难确定因果关系。将宏基因组学整合到临床医学中是一个挑战,作者强调了对于宏基因组学的有用医学应用具有高优先级的临床方法。请在文章后面查看编辑摘要。