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通过DNA限制性内切酶分析和细胞包膜的聚丙烯酰胺凝胶电泳对气单胞菌菌株进行分型。

Typing of Aeromonas strains by DNA restriction endonuclease analysis and polyacrylamide gel electrophoresis of cell envelopes.

作者信息

Kuijper E J, van Alphen L, Leenders E, Zanen H C

机构信息

Department of Medical Microbiology, University of Amsterdam, The Netherlands.

出版信息

J Clin Microbiol. 1989 Jun;27(6):1280-5. doi: 10.1128/jcm.27.6.1280-1285.1989.

Abstract

The outer membrane protein (OMP) composition (OMP typing) of 46 fecal Aeromonas strains from hybridization groups (HGs) 1 (A. hydrophila; n = 10), 4 (A. caviae; n = 16), and 8 (A. veronii; n = 20) were examined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis as a phenotypic typing method. Almost every isolate of HG-1 and HG-8 had a unique OMP profile, in contrast to isolates of HG-4, which were separated into five different OMP types. It was possible to recognize HGs 1, 4, and 8 by OMP profiles. Twenty-three Aeromonas strains from HGs 1 (n = 5), 4 (n = 10), and 8 (n = 8) were tested by whole-cell DNA restriction endonuclease analysis (REA) as a genetic typing method. All strains tested by REA (with SmaI) had different DNA digestion patterns. Although additional DNA-rRNA hybridization analyses with SmaI and 16S and 23S rRNAs from Escherichia coli showed a reduction in the number of restriction bands to 8 to 13 hybridized fragments, the discriminative value was less when compared with that obtained by REA. The individual differences found by REA were used to analyze whether patients remained colonized by the same Aeromonas strain. Of 11 patients with diarrhea, 2 had a different isolate on repeat culture. In addition, one of nine tested fecal samples contained two Aeromonas isolates with different REA patterns. These results indicate that during diarrheal disease the intestinal tract may be colonized simultaneously with different Aeromonas isolates.

摘要

采用十二烷基硫酸钠-聚丙烯酰胺凝胶电泳作为表型分型方法,检测了杂交群(HG)1(嗜水气单胞菌;n = 10)、4(豚鼠气单胞菌;n = 16)和8(维氏气单胞菌;n = 20)的46株粪便气单胞菌菌株的外膜蛋白(OMP)组成(OMP分型)。与HG-4菌株不同,HG-1和HG-8的几乎每一株分离菌都有独特的OMP图谱,HG-4菌株被分为五种不同的OMP类型。通过OMP图谱可以识别HG 1、4和8。采用全细胞DNA限制性内切酶分析(REA)作为基因分型方法,检测了来自HG 1(n = 5)、4(n = 10)和8(n = 8)的23株气单胞菌菌株。所有经REA(用SmaI)检测的菌株都有不同的DNA消化模式。尽管用来自大肠杆菌的SmaI以及16S和23S rRNA进行的额外DNA-rRNA杂交分析显示限制性条带数量减少至8至13个杂交片段,但与REA相比,其鉴别价值较小。REA发现的个体差异用于分析患者是否仍被同一气单胞菌菌株定植。在11例腹泻患者中,2例在重复培养时有不同的分离菌。此外,9份检测的粪便样本中有1份含有两种具有不同REA模式的气单胞菌分离菌。这些结果表明,在腹泻疾病期间,肠道可能同时被不同的气单胞菌分离菌定植。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cf5/267542/a667a10dfd4d/jcm00066-0158-a.jpg

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