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对从造纸和制浆厂废水灌溉土壤中分离出的芽孢杆菌所产生的β-1,4-内切葡聚糖酶的评估。

Evaluation of β-1,4-endoglucanases produced by bacilli isolated from paper and pulp mill effluents irrigated soil.

作者信息

Pandey Sangeeta, Tiwari Rameshwar, Singh Surender, Nain Lata, Saxena Anil Kumar

机构信息

Division of Microbiology, Indian Agricultural Research Institute, New Delhi - 110012, India.

出版信息

J Microbiol Biotechnol. 2014 Aug;24(8):1073-80. doi: 10.4014/jmb.1311.11051.

Abstract

A total of 10 cellulase-producing bacteria were isolated from soil samples irrigated with paper and pulp mill effluents. The sequencing of 16S rRNA gene revealed that all isolates belonged to different species of genus Bacillus. Among the different isolates, B. subtilis IARI-SP-1 exhibited a high degree of β-1,4-endoglucanase (2.5 IU/ml), β-1,4-exoglucanase (0.8 IU/ml), and β-glucosidase (0.084 IU/ml) activity, followed by B. amyloliquefaciens IARI-SP-2. CMC was found to be the best carbon source for production of endo/exoglucanase and β-glucosidase. The β-1,4-endoglucanase gene was amplified from all isolates and their deduced amino acid sequences belonged to glycosyl hydrolase family 5. Among the domains of different isolates, the catalytic domains exhibited the highest homology of 93.7%, whereas the regions of signal, leader, linker, and carbohydrate-binding domain indicated low homology (73-74%). These variations in sequence homology are significant and could contribute to the structure and function of the enzyme.

摘要

从用造纸和制浆厂废水灌溉的土壤样本中总共分离出10株产纤维素酶的细菌。16S rRNA基因测序表明,所有分离株均属于芽孢杆菌属的不同种。在不同的分离株中,枯草芽孢杆菌IARI-SP-1表现出较高的β-1,4-内切葡聚糖酶(2.5 IU/ml)、β-1,4-外切葡聚糖酶(0.8 IU/ml)和β-葡萄糖苷酶(0.084 IU/ml)活性,其次是解淀粉芽孢杆菌IARI-SP-2。发现羧甲基纤维素是生产内切/外切葡聚糖酶和β-葡萄糖苷酶的最佳碳源。从所有分离株中扩增出β-1,4-内切葡聚糖酶基因,其推导的氨基酸序列属于糖基水解酶家族5。在不同分离株的结构域中,催化结构域的同源性最高,为93.7%,而信号、前导、连接和碳水化合物结合结构域的同源性较低(73-74%)。序列同源性的这些差异很显著,可能对酶的结构和功能有影响。

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