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纤维素分解奥里科拉菌属,新属,新种,一种从海滨表层水中分离出的叶杆菌科纤维素降解细菌,以及对百脉根中生根瘤菌和紫金牛叶杆菌的修订描述。

Oricola cellulosilytica gen. nov., sp. nov., a cellulose-degrading bacterium of the family Phyllobacteriaceae isolated from surface seashore water, and emended descriptions of Mesorhizobium loti and Phyllobacterium myrsinacearum.

作者信息

Hameed Asif, Shahina Mariyam, Lai Wei-An, Lin Shih-Yao, Young Li-Sen, Liu You-Cheng, Hsu Yi-Han, Young Chiu-Chung

机构信息

Department of Soil & Environmental Sciences, College of Agriculture and Natural Resources, National Chung Hsing University, Taichung, 402, Taiwan.

出版信息

Antonie Van Leeuwenhoek. 2015 Mar;107(3):759-71. doi: 10.1007/s10482-014-0370-6. Epub 2015 Jan 8.

Abstract

A Gram-stain negative, strictly aerobic, rod-shaped, non-spore-forming, motile cellulolytic bacterium, designated strain CC-AMH-0(T), was isolated from surface seashore water of Hualien, Taiwan and subjected to polyphasic taxonomy. Strain CC-AMH-0(T) exhibited enzymatic saccharification of cellulose and active growth particularly during log-phase under nutrient-limited conditions, whereas enhanced saccharification was found in the declining growth phase under copiotrophic conditions. The novel strain shared high pairwise 16S rRNA gene sequence similarities to Mesorhizobium loti USDA 3471(T) (96.2 %), Phyllobacterium myrsinacearum IAM 13584(T) (95.9 %), Hoeflea marina LMG 128(T) (94.0 %) and other Phyllobacteriaceae members. However, phylogenetic analyses based on 16S rRNA, atpD and recA gene sequences clearly distinguished strain CC-AMH-0(T) from other representatives of related genera. In addition, strain CC-AMH-0(T) was distinguished from the above mentioned species by significantly lacking phosphatidylcholine besides accommodating major amounts of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylmonomethylethanolamine and sulfoquinovosyldiacylglycerol; moderate amounts of phosphatidylethanolamine and trace amounts of an unidentified phospholipid, an unidentified aminolipid and an unidentified phosphoglycolipid. Strain CC-AMH-0(T) possessed C18:1 ω7c and/or C18:1 ω6c (summed feature 8) as predominant fatty acids, 63.3 mol% DNA G+C content and ubiquinone-10 (Q-10) as the sole respiratory quinone. On the basis of polyphasic taxonomic evidences, strain CC-AMH-0(T) is proposed to represent a novel genus and species of the family Phyllobacteriaceae, for which the name Oricola cellulosilytica gen. nov., sp. nov. is proposed. The type strain of the type species is CC-AMH-0(T) (=JCM 19534(T) =BCRC 80694(T)). Emended descriptions of M. loti and P. myrsinacearum are also proposed.

摘要

从台湾花莲的海滨表层水体中分离出一株革兰氏染色阴性、严格需氧、杆状、无芽孢形成、具运动性的纤维素分解细菌,命名为菌株CC-AMH-0(T),并对其进行了多相分类研究。菌株CC-AMH-0(T)表现出纤维素的酶促糖化作用,并且在营养限制条件下对数生长期尤其能活跃生长,而在富营养条件下生长下降期糖化作用增强。该新菌株与百脉根中生根瘤菌USDA 3471(T)(96.2%)、紫金牛叶杆菌IAM 13584(T)(95.9%)、海洋霍夫勒菌LMG 128(T)(94.0%)以及其他叶杆菌科成员具有较高的16S rRNA基因序列相似性。然而,基于16S rRNA、atpD和recA基因序列的系统发育分析清楚地将菌株CC-AMH-0(T)与相关属的其他代表区分开来。此外,菌株CC-AMH-0(T)除了含有大量的双磷脂酰甘油、磷脂酰甘油、磷脂酰单甲基乙醇胺和磺基喹喔啉二酰基甘油外,显著缺乏磷脂酰胆碱,以此与上述物种相区分;含有适量的磷脂酰乙醇胺以及痕量的一种未鉴定的磷脂、一种未鉴定的氨基脂和一种未鉴定的磷酸糖脂。菌株CC-AMH-0(T)以C18:1 ω7c和/或C18:1 ω6c(总特征8)作为主要脂肪酸,DNA G+C含量为63.3 mol%,并以泛醌-10(Q-10)作为唯一的呼吸醌。基于多相分类证据,菌株CC-AMH-0(T)被提议代表叶杆菌科的一个新属和新种,为此提出新名称纤维素分解海洋杆菌属(Oricola cellulosilytica),新种。模式种的模式菌株为CC-AMH-0(T)(=JCM 19534(T)=BCRC 80694(T))。还提出了对百脉根中生根瘤菌和紫金牛叶杆菌的修订描述。

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