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原发性免疫球蛋白重链基因库的分子克隆:成年小鼠中VH基因使用情况的定量分析

Molecular cloning of the primary IgH repertoire: a quantitative analysis of VH gene usage in adult mice.

作者信息

Sheehan K M, Brodeur P H

机构信息

Immunology Program, Sackler School of Graduate Biomedical Sciences, Boston, MA.

出版信息

EMBO J. 1989 Aug;8(8):2313-20. doi: 10.1002/j.1460-2075.1989.tb08358.x.

DOI:10.1002/j.1460-2075.1989.tb08358.x
PMID:2477243
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC401164/
Abstract

The generation of the primary antibody repertoire requires the somatic rearrangement of germline gene segments. It is not known, however, whether all functional V and J gene segments have an equal probability of contributing to this initial set of antibody specificities. To address this issue, we have examined the relative utilization of VH and JH gene segments of the mouse. We have constructed VH cDNA phage libraries from C mu transcripts obtained from polyclonally activated spleen cells of the BALB/c and C57BL/6 strains. We show that probes specific for either one, two or three functional VH gene segments hybridize to cDNAs at frequencies directly proportional to the number of functional germline VH genes detected by each probe. In contrast, the representation of 10 VH gene families within each library indicates that certain families are under-represented relative to their estimated germline gene number. These families must either have extraordinary proportions of nonfunctional genes or are influenced by as yet unidentified regulatory mechanisms or constraints on rearrangement.

摘要

初级抗体库的产生需要种系基因片段的体细胞重排。然而,尚不清楚所有功能性V基因片段和J基因片段对这组初始抗体特异性的贡献概率是否相同。为了解决这个问题,我们研究了小鼠VH和JH基因片段的相对利用率。我们从BALB/c和C57BL/6品系多克隆激活的脾细胞中获得的Cμ转录本构建了VH cDNA噬菌体文库。我们发现,针对一个、两个或三个功能性VH基因片段的特异性探针与cDNA杂交的频率与每个探针检测到的功能性种系VH基因数量成正比。相比之下,每个文库中10个VH基因家族的表现表明,某些家族相对于其估计的种系基因数量而言代表性不足。这些家族要么具有极高比例的非功能性基因,要么受到尚未确定的调控机制或重排限制的影响。

相似文献

1
Molecular cloning of the primary IgH repertoire: a quantitative analysis of VH gene usage in adult mice.原发性免疫球蛋白重链基因库的分子克隆:成年小鼠中VH基因使用情况的定量分析
EMBO J. 1989 Aug;8(8):2313-20. doi: 10.1002/j.1460-2075.1989.tb08358.x.
2
Developmentally regulated and strain-specific expression of murine VH gene families.小鼠VH基因家族的发育调控及品系特异性表达。
J Exp Med. 1988 Jul 1;168(1):417-35. doi: 10.1084/jem.168.1.417.
3
Stochastic pairing of heavy-chain and kappa light-chain variable gene families occurs in polyclonally activated B cells.重链和κ轻链可变基因家族的随机配对发生在多克隆激活的B细胞中。
Proc Natl Acad Sci U S A. 1990 Jul;87(13):4932-6. doi: 10.1073/pnas.87.13.4932.
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The utilization of individual VH exons in the primary repertoire of adult BALB/c mice.成年BALB/c小鼠初级抗体库中单个VH外显子的利用情况。
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Physical linkage of a variable region segment and the joining region segment of the human immunoglobulin heavy chain locus.人类免疫球蛋白重链基因座可变区片段与连接区片段的物理连接。
Biochem Biophys Res Commun. 1988 Jul 15;154(1):265-71. doi: 10.1016/0006-291x(88)90679-1.
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Reassessment of germline heavy chain transcripts from two murine VH families.对来自两个小鼠VH家族的种系重链转录本的重新评估。
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Strain-dependent expression of VH gene families.VH基因家族的菌株依赖性表达。
J Immunol. 1988 Apr 1;140(7):2436-41.
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Differential expression of VH gene families in peripheral B cell repertoires of newborn or adult immunoglobulin H chain congenic mice.新生或成年免疫球蛋白H链同基因小鼠外周B细胞库中VH基因家族的差异表达。
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Repertoire diversification in mice with an IgH-locus-targeted transgene for the rearranged VH domain of a physiologically selected anti-ssDNA antibody.具有针对生理选择的抗单链DNA抗体重排VH结构域的IgH基因座靶向转基因小鼠的 repertoire 多样化。
Mol Immunol. 2005 Aug;42(12):1475-84. doi: 10.1016/j.molimm.2005.01.010. Epub 2005 Mar 5.

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Front Immunol. 2020 Dec 1;11:602868. doi: 10.3389/fimmu.2020.602868. eCollection 2020.
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Nucleic Acids Res. 2003 Nov 15;31(22):e139. doi: 10.1093/nar/gng139.
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Antigen receptor loci poised for V(D)J rearrangement are broadly associated with BRG1 and flanked by peaks of histone H3 dimethylated at lysine 4.

本文引用的文献

1
A single VH gene segment encodes the immune response to phosphorylcholine: somatic mutation is correlated with the class of the antibody.单个VH基因片段编码对磷酸胆碱的免疫反应:体细胞突变与抗体类别相关。
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Preferential rearrangement of V kappa 4 gene segments in pre-B cell lines.前B细胞系中Vκ4基因片段的优先重排。
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8
Selection of antigen-specific, idiotype-positive B cells in transgenic mice expressing a rearranged M167-mu heavy chain gene.在表达重排的M167-μ重链基因的转基因小鼠中对抗原特异性、独特型阳性B细胞的选择。
J Exp Med. 1991 Nov 1;174(5):1189-201. doi: 10.1084/jem.174.5.1189.
9
Demonstration of a divergent transcript from the bidirectional heavy chain immunoglobulin promoter VH441 in B-cells.在B细胞中双向重链免疫球蛋白启动子VH441的一个发散转录本的证明。
Nucleic Acids Res. 1991 Oct 11;19(19):5339-44. doi: 10.1093/nar/19.19.5339.
10
In situ studies of the primary immune response to (4-hydroxy-3-nitrophenyl)acetyl. I. The architecture and dynamics of responding cell populations.对(4-羟基-3-硝基苯基)乙酰基的初次免疫反应的原位研究。I. 反应细胞群体的结构与动态
J Exp Med. 1991 May 1;173(5):1165-75. doi: 10.1084/jem.173.5.1165.
免疫球蛋白重链恒定区基因的5'侧翼区域在近交系小鼠品系的种系中表现出长度多态性。
Cell. 1980 Nov;22(1 Pt 1):187-96. doi: 10.1016/0092-8674(80)90167-1.
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Purification of mouse immunoglobulin heavy-chain messenger RNAs from total myeloma tumor RNA.从小鼠骨髓瘤肿瘤总RNA中纯化小鼠免疫球蛋白重链信使RNA。
Eur J Biochem. 1980 Jun;107(2):303-14. doi: 10.1111/j.1432-1033.1980.tb06030.x.
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A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.一种将DNA限制性内切酶片段放射性标记至高比活度的技术。
Anal Biochem. 1983 Jul 1;132(1):6-13. doi: 10.1016/0003-2697(83)90418-9.
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Transcriptional regulation of the mu-delta heavy chain locus in normal murine B lymphocytes.正常小鼠B淋巴细胞中μ-δ重链基因座的转录调控。
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A simple and very efficient method for generating cDNA libraries.一种简单且非常有效的生成cDNA文库的方法。
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VH genes encoding the immune response to beta-(1,6)-galactan: somatic mutation in IgM molecules.编码针对β-(1,6)-半乳聚糖免疫应答的VH基因:IgM分子中的体细胞突变
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Eur J Immunol. 1984 Oct;14(10):922-30. doi: 10.1002/eji.1830141012.