Schmidt Nathan W, Wong Gerard C L
Department of Bioengineering, Department of Chemistry and Biochemistry, California NanoSystems Institute, University of California, Los Angeles, California 90095, United States.
Curr Opin Solid State Mater Sci. 2013 Aug;17(4):151-163. doi: 10.1016/j.cossms.2013.09.004.
Short cationic, amphipathic antimicrobial peptides are multi-functional molecules that have roles in host defense as direct microbicides and modulators of the immune response. While a general mechanism of microbicidal activity involves the selective disruption and permeabilization of cell membranes, the relationships between peptide sequence and membrane activity are still under investigation. Here, we review the diverse functions that AMPs collectively have in host defense, and show that these functions can be multiplexed with a membrane mechanism of activity derived from the generation of negative Gaussian membrane curvature. As AMPs preferentially generate this curvature in model bacterial cell membranes, the selective generation of negative Gaussian curvature provides AMPs with a broad mechanism to target microbial membranes. The amino acid constraints placed on AMPs by the geometric requirement to induce negative Gaussian curvature are consistent with known AMP sequences. This 'saddle-splay curvature selection rule' is not strongly restrictive so AMPs have significant compositional freedom to multiplex membrane activity with other useful functions. The observation that certain proteins involved in cellular processes which require negative Gaussian curvature contain domains with similar motifs as AMPs, suggests this rule may be applicable to other curvature-generating proteins. Since our saddle-splay curvature design rule is based upon both a mechanism of activity and the existing motifs of natural AMPs, we believe it will assist the development of synthetic antimicrobials.
短链阳离子两亲性抗菌肽是多功能分子,在宿主防御中作为直接杀菌剂和免疫反应调节剂发挥作用。虽然杀菌活性的一般机制涉及细胞膜的选择性破坏和通透性改变,但肽序列与膜活性之间的关系仍在研究中。在这里,我们综述了抗菌肽在宿主防御中共同具有的多种功能,并表明这些功能可以与源自负高斯膜曲率产生的膜活性机制相结合。由于抗菌肽在模型细菌细胞膜中优先产生这种曲率,负高斯曲率的选择性产生为抗菌肽提供了一种靶向微生物膜的广泛机制。诱导负高斯曲率的几何要求对抗菌肽施加的氨基酸限制与已知的抗菌肽序列一致。这种“鞍形展曲曲率选择规则”限制不强,因此抗菌肽在将膜活性与其他有用功能相结合方面具有很大的组成自由度。观察到某些参与需要负高斯曲率的细胞过程的蛋白质含有与抗菌肽类似基序的结构域,这表明该规则可能适用于其他产生曲率的蛋白质。由于我们的鞍形展曲曲率设计规则基于活性机制和天然抗菌肽的现有基序,我们相信它将有助于合成抗菌剂的开发。