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提出新属溢多菌属,建议将巴氏溢多杆菌重新分类为溢多杆菌巴氏亚种复合群和环脂酸芽孢杆菌协同亚种复合群。

Proposal of Effusibacillus lacus gen. nov., sp. nov., and reclassification of Alicyclobacillus pohliae as Effusibacillus pohliae comb. nov. and Alicyclobacillus consociatus as Effusibacillus consociatus comb. nov.

机构信息

The Institute of Low Temperature Science, Hokkaido University, Sapporo, Hokkaido, Japan.

出版信息

Int J Syst Evol Microbiol. 2014 Aug;64(Pt 8):2770-2774. doi: 10.1099/ijs.0.055814-0. Epub 2014 May 23.

Abstract

A novel thermophilic, facultatively anaerobic bacterium, strain skLN1(T), was isolated from the sediment of a freshwater lake in Japan. Cells of strain skLN1(T) were rod-shaped and Gram-stain-variable. A KOH lysis test suggested that the cell wall of the isolate has a Gram-positive structure. For aerobic growth, the optimum pH was pH 7.25-7.50 and the optimum temperature was 50-52 °C. The G+C content of the genomic DNA was 50.8 mol%. Nitrate was reduced to nitrite. Alicyclic fatty acids were not detected, and branched-chain fatty acids were major components in the cellular fatty acid profile. MK-7 was the predominant respiratory quinone. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the isolated strain was related most closely to Alicyclobacillus consociatus CCUG 53762(T) (95% similarity). This analysis also showed that the monophyly of the genus Alicyclobacillus had been lost. On the basis of phylogenetic and phenotypic characterization, Effusibacillus lacus gen. nov., sp. nov. is proposed. The type strain of Effusibacillus lacus is skLN1(T) ( = NBRC 109614(T) = DSM 27172(T)). It is also proposed that Alicyclobacillus pohliae and Alicyclobacillus consociatus should be reclassified to the genus Effusibacillus as Effusibacillus pohliae comb. nov. and Effusibacillus consociatus comb. nov., respectively.

摘要

从日本一个淡水湖的沉积物中分离到一株新型嗜热、兼性厌氧细菌,命名为 skLN1(T) 菌株。skLN1(T) 菌株的细胞呈杆状,革兰氏染色可变。KOH 裂解试验表明该菌的细胞壁具有革兰氏阳性结构。在好氧生长条件下,最适 pH 值为 7.25-7.50,最适温度为 50-52°C。基因组 DNA 的 G+C 含量为 50.8mol%。该菌能够还原硝酸盐为亚硝酸盐。该菌不含有脂环脂肪酸,支链脂肪酸为其细胞脂肪酸组成的主要成分。MK-7 为主要的呼吸醌。基于 16S rRNA 基因序列的系统发育分析表明,该分离株与 Alicyclobacillus consociatus CCUG 53762(T)(95%相似性)最为密切相关。该分析还表明,Alicyclobacillus 属的单系性已经丧失。基于系统发育和表型特征,提议创建 Effusibacillus lacus 属,新属,新种。Effusibacillus lacus 的模式菌株为 skLN1(T)(=NBRC 109614(T)=DSM 27172(T))。还提议将 Alicyclobacillus pohliae 和 Alicyclobacillus consociatus 重新分类到 Effusibacillus 属,分别作为 Effusibacillus pohliae comb. nov. 和 Effusibacillus consociatus comb. nov.。

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