Kucukkal Tugba G, Yang Ye, Chapman Susan C, Cao Weiguo, Alexov Emil
Department of Physics, Clemson University, Clemson, SC 29634, USA.
Department of Genetics and Biochemistry, Clemson University, 049 Life Sciences Facility, 190 Collins Street, Clemson, SC 29634, USA.
Int J Mol Sci. 2014 May 30;15(6):9670-717. doi: 10.3390/ijms15069670.
DNA mutations are the cause of many human diseases and they are the reason for natural differences among individuals by affecting the structure, function, interactions, and other properties of DNA and expressed proteins. The ability to predict whether a given mutation is disease-causing or harmless is of great importance for the early detection of patients with a high risk of developing a particular disease and would pave the way for personalized medicine and diagnostics. Here we review existing methods and techniques to study and predict the effects of DNA mutations from three different perspectives: in silico, in vitro and in vivo. It is emphasized that the problem is complicated and successful detection of a pathogenic mutation frequently requires a combination of several methods and a knowledge of the biological phenomena associated with the corresponding macromolecules.
DNA突变是许多人类疾病的病因,它们通过影响DNA和表达蛋白质的结构、功能、相互作用及其他特性,导致个体间的自然差异。预测特定突变是致病还是无害的能力,对于早期发现患特定疾病风险高的患者至关重要,将为个性化医疗和诊断铺平道路。在此,我们从三个不同角度综述研究和预测DNA突变影响的现有方法和技术:计算机模拟、体外和体内。需要强调的是,该问题很复杂,成功检测致病突变通常需要多种方法的结合以及对与相应大分子相关的生物学现象的了解。